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Gm21742 Pseudogene Detail
Summary
  • Symbol
    Gm21742
  • Name
    predicted gene, 21742
  • Feature Type
    pseudogene
  • IDs
    MGI:5433906
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrY:90848682-90855309 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome XY, Syntenic
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5433906
 pseudogene ChrY:90848682-90855309 (+)
129S1/SvImJ MGP_129S1SvImJ_G0040671
 pseudogene Chr9:126990642-126997267 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0040711
 pseudogene ChrX:165262863-165269490 (+)
C3H/HeJ MGP_C3HHeJ_G0040342
 pseudogene ChrX:168530936-168538325 (+)
C57BL/6NJ MGP_C57BL6NJ_G0041413
 pseudogene ChrX:173062254-173069671 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0037528
 pseudogene ChrX:158010092-158024526 (+)
CAST/EiJ MGP_CASTEiJ_G0039383
 pseudogene ChrX:147353103-147355969 (-)
CBA/J MGP_CBAJ_G0040312
 pseudogene ChrX:178090027-178098250 (+)
DBA/2J MGP_DBA2J_G0040527
 pseudogene ChrX:166076199-166082828 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0040567
 pseudogene ChrX:169294456-169301929 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0041463
 pseudogene ChrX:167681805-167689274 (+)
PWK/PhJ MGP_PWKPhJ_G0039031
 pseudogene ChrX:144047470-144054900 (+)
SPRET/EiJ MGP_SPRETEiJ_G0038748
 pseudogene ChrX:148010075-148025456 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    15
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000099871 Ensembl Gene Model | MGI Sequence Detail 6628 C57BL/6J ±  kb
transcript ENSMUST00000189352 Ensembl | MGI Sequence Detail 548 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
    Phenotypes 2
  • Earliest
    J:91812 Stryke D, et al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Nucleic Acids Res. 2003 Jan 1;31(1):278-81
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory