Gm20712 Gene Detail

Summary

• Symbol
  Gm20712
• Name
  predicted gene 20712

• Feature Type
  lncRNA gene
• IDs
  MGI:5313159
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:58652310-58653800 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 25.09 cM

Strain
Comparison

• SNPs within 2kb
  31 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313159	lncRNA gene	Chr15:58652310-58653800 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037106	sense overlapping lncRNA gene	Chr15:57983993-57985482 (-)
A/J	MGP_AJ_G0037093	sense overlapping lncRNA gene	Chr15:55716173-55717663 (-)
AKR/J	MGP_AKRJ_G0037041	sense overlapping lncRNA gene	Chr15:57252524-57254014 (-)
BALB/cJ	MGP_BALBcJ_G0037084	sense overlapping lncRNA gene	Chr15:55935712-55937202 (-)
C3H/HeJ	MGP_C3HHeJ_G0036771	sense overlapping lncRNA gene	Chr15:57378390-57379885 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037598	sense overlapping lncRNA gene	Chr15:60232342-60233832 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034641	sense overlapping lncRNA gene	Chr15:52802988-52804517 (-)
CAST/EiJ	MGP_CASTEiJ_G0035958	sense overlapping lncRNA gene	Chr15:58033466-58034959 (-)
CBA/J	MGP_CBAJ_G0036746	sense overlapping lncRNA gene	Chr15:62316432-62317921 (-)
DBA/2J	MGP_DBA2J_G0036921	sense overlapping lncRNA gene	Chr15:55629608-55631097 (-)
FVB/NJ	MGP_FVBNJ_G0036871	sense overlapping lncRNA gene	Chr15:54675335-54676823 (-)
LP/J	MGP_LPJ_G0036968	sense overlapping lncRNA gene	Chr15:57839674-57841163 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036879	sense overlapping lncRNA gene	Chr15:67383565-67385055 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037715	sense overlapping lncRNA gene	Chr15:57659385-57660875 (-)
PWK/PhJ	MGP_PWKPhJ_G0035652	sense overlapping lncRNA gene	Chr15:55628433-55629932 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035459	sense overlapping lncRNA gene	Chr15:57456563-57458093 (-)
WSB/EiJ	MGP_WSBEiJ_G0036160	sense overlapping lncRNA gene	Chr15:57657056-57658548 (-)

Homology

• Gene Tree
  Gm20712
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  23 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  3
• Radiation induced
  2
• Genomic Mutations
  5 involving Gm20712
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000093677 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093677	Ensembl Gene Model | MGI Sequence Detail	1491	C57BL/6J
transcript	ENSMUST00000176387	Ensembl | MGI Sequence Detail	1491	Not Applicable

References

• Summaries
  All 25

  Diseases 1

  Phenotypes 23
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27