Gm20706 Pseudogene Detail

Summary

• Symbol
  Gm20706
• Name
  predicted gene 20706

• Feature Type
  pseudogene
• IDs
  MGI:5313153
  NCBI Gene: 102634112
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:24138340-24140362 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 11.24 cM

Strain
Comparison

• SNPs within 2kb
  53 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313153	pseudogene	Chr6:24138316-24141719 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0013374	pseudogene	Chr6:20788654-20790671 (-)
AKR/J	MGP_AKRJ_G0013337	pseudogene	Chr6:21442316-21444337 (-)
BALB/cJ	MGP_BALBcJ_G0013352	pseudogene	Chr6:20880583-20888799 (-)
C3H/HeJ	MGP_C3HHeJ_G0013203	pseudogene	Chr6:21441523-21443583 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013732	pseudogene	Chr6:22383292-22385315 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011839	pseudogene	Chr6:19272808-19274812 (-)
CAST/EiJ	MGP_CASTEiJ_G0012913	pseudogene	Chr6:21309818-21311839 (-)
CBA/J	MGP_CBAJ_G0013170	pseudogene	Chr6:23129724-23131745 (-)
DBA/2J	MGP_DBA2J_G0013254	pseudogene	Chr6:20752214-20754274 (-)
FVB/NJ	MGP_FVBNJ_G0013251	pseudogene	Chr6:20512492-20514513 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0013268	pseudogene	Chr6:25044445-25046498 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013729	pseudogene	Chr6:21400763-21402780 (-)
PWK/PhJ	MGP_PWKPhJ_G0012726	pseudogene	Chr6:20306459-20308480 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012508	pseudogene	Chr6:21121177-21123190 (-)
WSB/EiJ	MGP_WSBEiJ_G0012955	pseudogene	Chr6:21331508-21333529 (-)

Homology

• Gene Tree
  Gm20706
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000093580 (Evidence)
• NCBI Gene
  102634112

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093580	Ensembl Gene Model | MGI Sequence Detail	2023	C57BL/6J
transcript	ENSMUST00000175985	Ensembl | MGI Sequence Detail	2023	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;