Gm20702 Pseudogene Detail

Summary

• Symbol
  Gm20702
• Name
  predicted gene 20702

• Feature Type
  pseudogene
• IDs
  MGI:5313149
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:101872339-101872798 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 51.31 cM

Strain
Comparison

• SNPs within 2kb
  22 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5313149	pseudogene	Chr12:101872339-101872798 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010940	pseudogene	Chr12:103509784-103510243 (+)
A/J	MGP_AJ_G0010947	pseudogene	Chr12:99534983-99535442 (+)
AKR/J	MGP_AKRJ_G0010902	pseudogene	Chr12:102370298-102370757 (+)
BALB/cJ	MGP_BALBcJ_G0010920	pseudogene	Chr12:99879136-99879595 (+)
C3H/HeJ	MGP_C3HHeJ_G0010818	pseudogene	Chr12:102819123-102819582 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011192	pseudogene	Chr12:106750942-106751401 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009798	pseudogene	Chr12:96564875-96565339 (+)
CAST/EiJ	MGP_CASTEiJ_G0010649	pseudogene	Chr12:97638412-97638882 (+)
CBA/J	MGP_CBAJ_G0010791	pseudogene	Chr12:110687478-110687937 (+)
DBA/2J	MGP_DBA2J_G0010840	pseudogene	Chr12:99061629-99062088 (+)
FVB/NJ	MGP_FVBNJ_G0010853	pseudogene	Chr12:97772465-97772924 (+)
LP/J	MGP_LPJ_G0010923	pseudogene	Chr12:103365854-103366313 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010833	pseudogene	Chr12:114186461-114186920 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011178	pseudogene	Chr12:101872532-101872991 (+)
PWK/PhJ	MGP_PWKPhJ_G0010533	pseudogene	Chr12:93611319-93611802 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010350	pseudogene	Chr12:96054323-96054778 (+)
WSB/EiJ	MGP_WSBEiJ_G0010692	pseudogene	Chr12:102752589-102753048 (+)

Homology

• Gene Tree
  Gm20702
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm20702
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000093437 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093437	Ensembl Gene Model | MGI Sequence Detail	460	C57BL/6J
transcript	ENSMUST00000176181	Ensembl | MGI Sequence Detail	460	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;