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Gm20700 Gene Detail
Summary
  • Symbol
    Gm20700
  • Name
    predicted gene 20700
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5313147
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:48748231-48757336 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 26.36 cM
Strain
Comparison
more
  • SNPs within 2kb
    132 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5313147
 lncRNA gene Chr5:48748231-48757336 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004079
 antisense lncRNA gene Chr5:47397363-47406472 (+)
A/J MGP_AJ_G0004060
 antisense lncRNA gene Chr5:45768384-45777484 (+)
AKR/J MGP_AKRJ_G0004038
 antisense lncRNA gene Chr5:47319567-47328673 (+)
BALB/cJ MGP_BALBcJ_G0004046
 antisense lncRNA gene Chr5:46260743-46269831 (+)
C3H/HeJ MGP_C3HHeJ_G0003992
 antisense lncRNA gene Chr5:47485842-47494947 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004195
 antisense lncRNA gene Chr5:49498250-49510727 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0003956
 antisense lncRNA gene Chr5:46460294-46469431 (+)
CBA/J MGP_CBAJ_G0003986
 antisense lncRNA gene Chr5:50932154-50942215 (+)
DBA/2J MGP_DBA2J_G0004001
 antisense lncRNA gene Chr5:45840614-45849868 (+)
FVB/NJ MGP_FVBNJ_G0004020
 antisense lncRNA gene Chr5:45219502-45228600 (+)
LP/J MGP_LPJ_G0004081
 antisense lncRNA gene Chr5:47862652-47871666 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004009
 antisense lncRNA gene Chr5:51972697-51985059 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004190
 antisense lncRNA gene Chr5:46866585-46876079 (+)
PWK/PhJ MGP_PWKPhJ_G0003909
 antisense lncRNA gene Chr5:44927144-44936543 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003854
 antisense lncRNA gene Chr5:46247445-46256767 (+)
WSB/EiJ MGP_WSBEiJ_G0003991
 antisense lncRNA gene Chr5:46921175-46931309 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    18 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Radiation induced
    2
  • Spontaneous
    1
  • Genomic Mutations
    5 involving Gm20700
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000093502 Ensembl Gene Model | MGI Sequence Detail 9106 C57BL/6J ±  kb
transcript ENSMUST00000176749 Ensembl | MGI Sequence Detail 2206 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 20
    Diseases 1
    Phenotypes 18
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory