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Gm20594 Gene Detail
Summary
  • Symbol
    Gm20594
  • Name
    predicted gene, 20594
  • Feature Type
    protein coding gene
  • IDs
    MGI:5295700
    NCBI Gene: 100463512
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:79818031-79818364 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 35.01 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    6 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5295700
protein coding gene Chr6:79817916-79818364 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030899
protein coding gene Chr6:80675553-80676001 (+)
A/J MGP_AJ_G0030868
protein coding gene Chr6:77558928-77559376 (+)
AKR/J MGP_AKRJ_G0030796
protein coding gene Chr6:79798244-79798692 (+)
BALB/cJ MGP_BALBcJ_G0030878
protein coding gene Chr6:77613487-77613935 (+)
C3H/HeJ MGP_C3HHeJ_G0030832
protein coding gene Chr6:104499644-104500587 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031338
protein coding gene Chr6:82848382-82848830 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0029987
protein coding gene Chr6:79763673-79764123 (+)
CBA/J MGP_CBAJ_G0030565
protein coding gene Chr6:86084452-86084900 (+)
DBA/2J MGP_DBA2J_G0030718
protein coding gene Chr6:76904866-76905314 (+)
FVB/NJ MGP_FVBNJ_G0030671
protein coding gene Chr6:76174573-76175021 (+)
LP/J MGP_LPJ_G0030797
protein coding gene Chr6:80632001-80632449 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030707
protein coding gene Chr6:90356515-90356963 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031362
protein coding gene Chr6:79625135-79625583 (+)
PWK/PhJ MGP_PWKPhJ_G0029702
protein coding gene Chr6:75825475-75825968 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029530
protein coding gene Chr6:78491239-78491686 (+)
WSB/EiJ MGP_WSBEiJ_G0030068
protein coding gene Chr6:80084484-80084932 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100463512 NCBI Gene Model | MGI Sequence Detail 334 C57BL/6J ±  kb
transcript NM_001190732 RefSeq | MGI Sequence Detail 334 Not Specified  
polypeptide NP_001177661 RefSeq | MGI Sequence Detail 37 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR028139 Humanin family
References
more
  • Summaries
    All 8
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/09/2019
MGI 6.13
The Jackson Laboratory