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Gm20547 Gene Detail
Summary
  • Symbol
    Gm20547
  • Name
    predicted gene 20547
  • Feature Type
    protein coding gene
  • IDs
    MGI:5142012
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:35075388-35101018 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 17, 18.41 cM
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5142012
protein coding gene Chr17:35075388-35101018 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023594
protein coding gene Chr17:34968229-34996966 (-)
A/J MGP_AJ_G0023556
protein coding gene Chr17:33826620-33853039 (-)
AKR/J MGP_AKRJ_G0023522
protein coding gene Chr17:34285492-34311880 (-)
BALB/cJ MGP_BALBcJ_G0023561
protein coding gene Chr17:33956932-33982663 (-)
C3H/HeJ MGP_C3HHeJ_G0023321
protein coding gene Chr17:34685730-34711519 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024001
protein coding gene Chr17:36305539-36335884 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021480
protein coding gene Chr17:31591307-31616809 (-)
CAST/EiJ MGP_CASTEiJ_G0022819
protein coding gene Chr17:34680603-34708187 (-)
CBA/J MGP_CBAJ_G0023299
protein coding gene Chr17:37817111-37844144 (-)
DBA/2J MGP_DBA2J_G0023427
protein coding gene Chr17:33140976-33167541 (-)
FVB/NJ MGP_FVBNJ_G0023394
protein coding gene Chr17:32971224-33000256 (-)
LP/J MGP_LPJ_G0023504
protein coding gene Chr17:35279085-35308163 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023417
protein coding gene Chr17:36745867-36774867 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024043
protein coding gene Chr17:34515373-34541900 (-)
PWK/PhJ MGP_PWKPhJ_G0022568
protein coding gene Chr17:31970630-31996689 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022385
protein coding gene Chr17:32516563-32544684 (-)
WSB/EiJ MGP_WSBEiJ_G0022881
protein coding gene Chr17:34624112-34650300 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092511 Ensembl Gene Model | MGI Sequence Detail 25631 C57BL/6J ±  kb
transcript ENSMUST00000146299 Ensembl | MGI Sequence Detail 3893 Not Applicable  
polypeptide ENSMUSP00000117677 Ensembl | MGI Sequence Detail 1276 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • EC
  • InterPro Domains
    IPR011360 Complement B/C2
    IPR001314 Peptidase S1A, chymotrypsin family
    IPR009003 Peptidase S1, PA clan
    IPR043504 Peptidase S1, PA clan, chymotrypsin-like fold
    IPR001254 Serine proteases, trypsin domain
    IPR018114 Serine proteases, trypsin family, histidine active site
    IPR033116 Serine proteases, trypsin family, serine active site
    IPR000436 Sushi/SCR/CCP domain
    IPR035976 Sushi/SCR/CCP superfamily
    IPR036465 von Willebrand factor A-like domain superfamily
    IPR002035 von Willebrand factor, type A
References
more
  • Summaries
    All 4
    Gene Ontology 1
  • Earliest
    J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory