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Gm20518 Gene Detail
Summary
  • Symbol
    Gm20518
  • Name
    predicted gene 20518
  • Feature Type
    protein coding gene
  • IDs
    MGI:5141983
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr16:17835277-17891671 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 11.05 cM
Strain
Comparison
more
  • SNPs within 2kb
    230 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5141983
protein coding gene Chr16:17835277-17891671 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022593
protein coding gene Chr16:15017837-15078547 (-)
A/J MGP_AJ_G0022554
protein coding gene Chr16:14270554-14327357 (-)
AKR/J MGP_AKRJ_G0022531
protein coding gene Chr16:14826088-14887032 (-)
BALB/cJ MGP_BALBcJ_G0022557
protein coding gene Chr16:14422420-14480481 (-)
C3H/HeJ MGP_C3HHeJ_G0022324
protein coding gene Chr16:14975421-15033614 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023008
protein coding gene Chr16:15252133-15320797 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020528
protein coding gene Chr16:14330179-14385876 (-)
CAST/EiJ MGP_CASTEiJ_G0021852
protein coding gene Chr16:14894833-14950140 (-)
CBA/J MGP_CBAJ_G0022295
protein coding gene Chr16:15929516-15994191 (-)
DBA/2J MGP_DBA2J_G0022425
protein coding gene Chr16:14183783-14239671 (-)
FVB/NJ MGP_FVBNJ_G0022401
protein coding gene Chr16:14231696-14289654 (-)
LP/J MGP_LPJ_G0022492
protein coding gene Chr16:14793723-14861963 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022422
protein coding gene Chr16:15616071-15673112 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023019
protein coding gene Chr16:14772249-14832422 (-)
PWK/PhJ MGP_PWKPhJ_G0021595
protein coding gene Chr16:14443678-14498456 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021423
protein coding gene Chr16:14743342-14801736 (-)
WSB/EiJ MGP_WSBEiJ_G0021899
protein coding gene Chr16:14760104-14816796 (-)



Homology
less
Human Diseases
less
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    36 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092470 Ensembl Gene Model | MGI Sequence Detail 56395 C57BL/6J ±  kb
transcript ENSMUST00000150068 Ensembl | MGI Sequence Detail 3811 Not Applicable  
polypeptide ENSMUSP00000115071 Ensembl | MGI Sequence Detail 580 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR016187 C-type lectin fold
    IPR001304 C-type lectin-like
    IPR016186 C-type lectin-like/link domain superfamily
    IPR034010 DGCR2-like, C-type lectin-like domain
    IPR042378 Integral membrane protein DGCR2/IDD
    IPR036055 LDL receptor-like superfamily
    IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site
    IPR002172 Low-density lipoprotein (LDL) receptor class A repeat
    IPR001007 VWFC domain
References
more
  • Summaries
    All 40
    Diseases 3
    Gene Ontology 1
    Phenotypes 36
  • Earliest
    J:58432 Kimber WL, et al., Deletion of 150 kb in the minimal DiGeorge/velocardiofacial syndrome critical region in mouse. Hum Mol Genet. 1999 Nov;8(12):2229-37
  • Latest
    J:289143 Welby L, et al., Persistent Feeding and Swallowing Deficits in a Mouse Model of 22q11.2 Deletion Syndrome. Front Neurol. 2020;11:4

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/13/2020
MGI 6.16
The Jackson Laboratory