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Gm20518 Gene Detail
Summary
  • Symbol
    Gm20518
  • Name
    predicted gene 20518
  • Feature Type
    protein coding gene
  • IDs
    MGI:5141983
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr16:17835277-17891671 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 11.05 cM
Strain
Comparison
more
  • SNPs within 2kb
    230 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5141983
protein coding gene Chr16:17835277-17891671 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022593
protein coding gene Chr16:15017837-15078547 (-)
A/J MGP_AJ_G0022554
protein coding gene Chr16:14270554-14327357 (-)
AKR/J MGP_AKRJ_G0022531
protein coding gene Chr16:14826088-14887032 (-)
BALB/cJ MGP_BALBcJ_G0022557
protein coding gene Chr16:14422420-14480481 (-)
C3H/HeJ MGP_C3HHeJ_G0022324
protein coding gene Chr16:14975421-15033614 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023008
protein coding gene Chr16:15252133-15320797 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020528
protein coding gene Chr16:14330179-14385876 (-)
CAST/EiJ MGP_CASTEiJ_G0021852
protein coding gene Chr16:14894833-14950140 (-)
CBA/J MGP_CBAJ_G0022295
protein coding gene Chr16:15929516-15994191 (-)
DBA/2J MGP_DBA2J_G0022425
protein coding gene Chr16:14183783-14239671 (-)
FVB/NJ MGP_FVBNJ_G0022401
protein coding gene Chr16:14231696-14289654 (-)
LP/J MGP_LPJ_G0022492
protein coding gene Chr16:14793723-14861963 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022422
protein coding gene Chr16:15616071-15673112 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023019
protein coding gene Chr16:14772249-14832422 (-)
PWK/PhJ MGP_PWKPhJ_G0021595
protein coding gene Chr16:14443678-14498456 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021423
protein coding gene Chr16:14743342-14801736 (-)
WSB/EiJ MGP_WSBEiJ_G0021899
protein coding gene Chr16:14760104-14816796 (-)



Homology
less
Human Diseases
less
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    32 phenotype references
Expression
less
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092470 Ensembl Gene Model | MGI Sequence Detail 56395 C57BL/6J ±  kb
transcript ENSMUST00000150068 Ensembl | MGI Sequence Detail 3811 Not Applicable  
polypeptide ENSMUSP00000115071 Ensembl | MGI Sequence Detail 580 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR016187 C-type lectin fold
    IPR001304 C-type lectin-like
    IPR016186 C-type lectin-like/link domain superfamily
    IPR034010 DGCR2-like, C-type lectin-like domain
    IPR042378 Integral membrane protein DGCR2/IDD
    IPR036055 LDL receptor-like superfamily
    IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site
    IPR002172 Low-density lipoprotein (LDL) receptor class A repeat
    IPR001007 VWFC domain
References
more
  • Summaries
    All 35
    Diseases 3
    Phenotypes 32
  • Earliest
    J:58432 Kimber WL, et al., Deletion of 150 kb in the minimal DiGeorge/velocardiofacial syndrome critical region in mouse. Hum Mol Genet. 1999 Nov;8(12):2229-37
  • Latest
    J:278079 Murano T, et al., Transcriptomic immaturity inducible by neural hyperexcitation is shared by multiple neuropsychiatric disorders. Commun Biol. 2019;2:32

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory