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Gm20394 Gene Detail
Summary
  • Symbol
    Gm20394
  • Name
    predicted gene 20394
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5141859
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:100240522-100241715 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 63.47 cM
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5141859
 lncRNA gene Chr11:100240522-100241715 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015208
 unclassified non-coding RNA gene Chr11:103109598-103110791 (-)
A/J MGP_AJ_G0015182
 unclassified non-coding RNA gene Chr11:98796021-98797437 (-)
AKR/J MGP_AKRJ_G0015145
 unclassified non-coding RNA gene Chr11:101839726-101840932 (-)
BALB/cJ MGP_BALBcJ_G0015144
 unclassified non-coding RNA gene Chr11:99279343-99280536 (-)
C3H/HeJ MGP_C3HHeJ_G0014968
 unclassified non-coding RNA gene Chr11:102041029-102043015 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015601
 unclassified non-coding RNA gene Chr11:106305035-106306221 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013344
 unclassified non-coding RNA gene Chr11:96212596-96213824 (-)
CAST/EiJ MGP_CASTEiJ_G0014521
 unclassified non-coding RNA gene Chr11:103003351-103005866 (-)
CBA/J MGP_CBAJ_G0014947
 unclassified non-coding RNA gene Chr11:110734011-110736618 (-)
DBA/2J MGP_DBA2J_G0015040
 unclassified non-coding RNA gene Chr11:98337519-98338865 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0015121
 unclassified non-coding RNA gene Chr11:103650197-103651363 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015078
 unclassified non-coding RNA gene Chr11:110349883-110351076 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015640
 unclassified non-coding RNA gene Chr11:102187694-102188887 (-)
PWK/PhJ MGP_PWKPhJ_G0014313
 unclassified non-coding RNA gene Chr11:99372685-99374270 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014100
 unclassified non-coding RNA gene Chr11:101903472-101904632 (-)
WSB/EiJ MGP_WSBEiJ_G0014624
 unclassified non-coding RNA gene Chr11:102170174-102171377 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092509 Ensembl Gene Model | MGI Sequence Detail 1194 C57BL/6J ±  kb
transcript ENSMUST00000173304 Ensembl | MGI Sequence Detail 942 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 10
    Phenotypes 8
  • Earliest
    J:50799 Liu P, et al., Embryonic lethality and tumorigenesis caused by segmental aneuploidy on mouse chromosome 11. Genetics. 1998 Nov;150(3):1155-68
  • Latest
    J:232020 Ermakova O, et al., Sensitized phenotypic screening identifies gene dosage sensitive region on chromosome 11 that predisposes to disease in mice. EMBO Mol Med. 2011 Jan;3(1):50-66
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory