Gm20324 Gene Detail

Summary

• Symbol
  Gm20324
• Name
  predicted gene, 20324

• Feature Type
  lncRNA gene
• IDs
  MGI:5012509
  NCBI Gene: 100504637
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr15:82783281-82790017 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 38.76 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5012509	lncRNA gene	Chr15:82783281-82790019 (+)
129S1/SvImJ	ENSMUSG00200054232	lncRNA gene	Chr15:79896885-79903624 (+)
A/J	ENSMUSG00195052215	lncRNA gene	Chr15:79828602-79835341 (+)
AKR/J	ENSMUSG00220053118	lncRNA gene	Chr15:79871788-79878527 (+)
BALB/cJ	ENSMUSG00180053554	lncRNA gene	Chr15:79705524-79712264 (+)
C3H/HeJ	ENSMUSG00175053464	lncRNA gene	Chr15:80016472-80023211 (+)
C57BL/6NJ	ENSMUSG00215052893	lncRNA gene	Chr15:79800889-79807628 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002927	antisense lncRNA gene	Chr15:76898566-76905266 (+)
CAST/EiJ	ENSTCUG00005048970	lncRNA gene	Chr15:79297171-79303934 (+)
CBA/J	ENSMUSG00210049257	lncRNA gene	Chr15:79791539-79798277 (+)
DBA/2J	ENSMUSG00185051424	lncRNA gene	Chr15:79824038-79830961 (+)
FVB/NJ	ENSMUSG00205051399	lncRNA gene	Chr15:79571110-79577851 (+)
JF1/MsJ	ENSUMUG00000056806	lncRNA gene	Chr15:79360382-79367122 (+)
LP/J	ENSMUSG00230046055	lncRNA gene	Chr15:83137231-83143969 (+)
NOD/ShiLtJ	ENSMUSG00190053691	lncRNA gene	Chr15:79808645-79815384 (+)
NZO/HlLtJ	ENSMUSG00225050362	lncRNA gene	Chr15:83475857-83482595 (+)
PWK/PhJ	ENSLUMG00010052910	lncRNA gene	Chr15:79569052-79575792 (+)
SPRET/EiJ	ENSMSPG00010050991	lncRNA gene	Chr15:81226155-81232846 (+)
WSB/EiJ	ENSIUOG00005050254	lncRNA gene	Chr15:79897696-79904436 (+)

Homology

• Gene Tree
  Gm20324
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  25 phenotype references
  

• All Mutations and Alleles
  17
• Chemically induced (other)
  1
• Gene trapped
  14
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm20324
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  5

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000100199 (Evidence)
• NCBI Gene
  100504637

Representative Sequences			Length	Strain/Species
genomic	100504637	NCBI Gene Model | MGI Sequence Detail	6737	C57BL/6J
transcript	NR_045068	RefSeq | MGI Sequence Detail	1116	ZRU/MplStud

Molecular
Reagents

• All nucleic 5

  cDNA 5

References

• Summaries
  All 31

  Diseases 1

  Phenotypes 25
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for Gm20324:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr132402	Chr15:82783219-82783236 (+)	-53 bp
Tssr132403	Chr15:82783240-82783259 (+)	-31 bp
Tssr132404	Chr15:82783261-82783283 (+)	-9 bp