Gm19277 Gene Detail

Summary

• Symbol
  Gm19277
• Name
  predicted gene, 19277

• Feature Type
  lncRNA gene
• IDs
  MGI:5011462
  NCBI Gene: 100502602
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:85033455-85040333 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 40.25 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  327 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011462	lncRNA gene	Chr15:85028940-85045897 (-)
129S1/SvImJ	ENSMUSG00200036199	lncRNA gene	Chr15:82153664-82160772 (-)
A/J	ENSMUSG00195021316	lncRNA gene	Chr15:82079994-82087102 (-)
AKR/J	ENSMUSG00220031685	lncRNA gene	Chr15:82137130-82144303 (-)
BALB/cJ	ENSMUSG00180015351	lncRNA gene	Chr15:81956801-81963910 (-)
C3H/HeJ	ENSMUSG00175029467	lncRNA gene	Chr15:82267659-82274767 (-)
C57BL/6NJ	ENSMUSG00215031524	lncRNA gene	Chr15:82052078-82059186 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030743	lncRNA gene	Chr15:81548086-81555231 (-)
CBA/J	ENSMUSG00210013248	lncRNA gene	Chr15:82042552-82049664 (-)
DBA/2J	ENSMUSG00185023321	lncRNA gene	Chr15:82073339-82080459 (-)
FVB/NJ	ENSMUSG00205037666	lncRNA gene	Chr15:81832626-81839799 (-)
JF1/MsJ	ENSUMUG00000042024	lncRNA gene	Chr15:81597960-81605089 (-)
LP/J	ENSMUSG00230045514	lncRNA gene	Chr15:85393876-85400984 (-)
NOD/ShiLtJ	ENSMUSG00190029574	lncRNA gene	Chr15:82070015-82077184 (-)
NZO/HlLtJ	ENSMUSG00225051107	lncRNA gene	Chr15:85735242-85742350 (-)
PWK/PhJ	ENSLUMG00010034298	lncRNA gene	Chr15:81805253-81812382 (-)
SPRET/EiJ	ENSMSPG00010014303	lncRNA gene	Chr15:83457085-83464192 (-)
WSB/EiJ	ENSIUOG00005011343	lncRNA gene	Chr15:82138144-82145267 (-)

Homology

• Gene Tree
  Gm19277
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  21 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm19277
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  35
• RefSeq
  1

• Ensembl
  ENSMUSG00000115924 (Evidence)
• NCBI Gene
  100502602

Representative Sequences			Length	Strain/Species
genomic	100502602	NCBI Gene Model | MGI Sequence Detail	6879	C57BL/6J
transcript	NR_040360	RefSeq | MGI Sequence Detail	1165	ZRU/MplStud

Molecular
Reagents

• All nucleic 4

  cDNA 4

References

• Summaries
  All 26

  Diseases 1

  Phenotypes 21
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for Gm19277:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr135752	Chr15:85040327-85040338 (-)	0 bp