Gm19165 Pseudogene Detail

Summary

• Symbol
  Gm19165
• Name
  predicted gene, 19165

• Feature Type
  pseudogene
• IDs
  MGI:5011350
  NCBI Gene: 100418369
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:59013874-59016307 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 28.07 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  27 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011350	pseudogene	Chr6:59013873-59016364 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013474	pseudogene	Chr6:58678931-58681364 (+)
A/J	MGP_AJ_G0013460	pseudogene	Chr6:56135164-56137597 (+)
AKR/J	MGP_AKRJ_G0013425	pseudogene	Chr6:57985422-57987855 (+)
BALB/cJ	MGP_BALBcJ_G0013439	pseudogene	Chr6:56425911-56428344 (+)
C3H/HeJ	MGP_C3HHeJ_G0013288	pseudogene	Chr6:57957361-57959794 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013824	pseudogene	Chr6:59958122-59960555 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011902	pseudogene	Chr6:53144713-53147190 (+)
CAST/EiJ	MGP_CASTEiJ_G0012995	pseudogene	Chr6:57624746-57627181 (+)
CBA/J	MGP_CBAJ_G0013257	pseudogene	Chr6:62455479-62457912 (+)
DBA/2J	MGP_DBA2J_G0013341	pseudogene	Chr6:55843009-55845442 (+)
FVB/NJ	MGP_FVBNJ_G0013338	pseudogene	Chr6:55389179-55391612 (+)
LP/J	MGP_LPJ_G0013411	pseudogene	Chr6:58598347-58600780 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013358	pseudogene	Chr6:65115925-65118358 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013822	pseudogene	Chr6:57843316-57845749 (+)
PWK/PhJ	MGP_PWKPhJ_G0012803	pseudogene	Chr6:55593001-55595456 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012585	pseudogene	Chr6:57048180-57050630 (+)
WSB/EiJ	MGP_WSBEiJ_G0013040	pseudogene	Chr6:58035158-58037591 (+)

Homology

• Gene Tree
  Gm19165
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000107449 (Evidence)
• NCBI Gene
  100418369

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107449	Ensembl Gene Model | MGI Sequence Detail	2434	C57BL/6J
transcript	ENSMUST00000204453	Ensembl | MGI Sequence Detail	1982	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;