Gm18985 Pseudogene Detail

Summary

• Symbol
  Gm18985
• Name
  predicted gene, 18985

• Feature Type
  pseudogene
• IDs
  MGI:5011170
  NCBI Gene: 100418077
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:3262940-3263760 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 1.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  21 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011170	pseudogene	Chr5:3262335-3263760 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0040373	pseudogene	Chr5:24392-25718 (+)
C3H/HeJ	MGP_C3HHeJ_G0039635	pseudogene	Chr12:5713482-5714805 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040981	pseudogene	Chr5:166843-168157 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037114	pseudogene	Chr12:5265795-5266924 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0039957	pseudogene	Chr5:11751-13086 (+)
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0038485	pseudogene	Chr14:11264191-11265638 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038455	pseudogene	Chr5:201874-203195 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm18985
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  12
• RefSeq
  1

• Ensembl
  ENSMUSG00000105800 (Evidence)
• NCBI Gene
  100418077

Representative Sequences			Length	Strain/Species
genomic	100418077	NCBI Gene Model | MGI Sequence Detail	821	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;