Gm18952 Pseudogene Detail

Summary

• Symbol
  Gm18952
• Name
  predicted gene, 18952

• Feature Type
  pseudogene
• IDs
  MGI:5011137
  NCBI Gene: 100418022
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:78665926-78666771 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 34.91 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  60 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011137	pseudogene	Chr3:78665925-78666771 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012237	pseudogene	Chr3:78394489-78395333 (+)
A/J	MGP_AJ_G0012232	pseudogene	Chr3:75881029-75881873 (+)
AKR/J	MGP_AKRJ_G0012198	pseudogene	Chr3:77614883-77615727 (+)
BALB/cJ	MGP_BALBcJ_G0012212	pseudogene	Chr3:75895576-75896420 (+)
C3H/HeJ	MGP_C3HHeJ_G0012084	pseudogene	Chr3:77943189-77944033 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012527	pseudogene	Chr3:81421115-81421960 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010924	pseudogene	Chr3:71544109-71545183 (+)
CAST/EiJ	MGP_CASTEiJ_G0011859	pseudogene	Chr3:77982990-77983852 (+)
CBA/J	MGP_CBAJ_G0012059	pseudogene	Chr3:84094073-84094917 (+)
DBA/2J	MGP_DBA2J_G0012116	pseudogene	Chr3:75445220-75446064 (+)
FVB/NJ	MGP_FVBNJ_G0012119	pseudogene	Chr3:73784216-73785060 (+)
LP/J	MGP_LPJ_G0012186	pseudogene	Chr3:79399381-79400225 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012121	pseudogene	Chr3:90399202-90400046 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012532	pseudogene	Chr3:77447723-77448567 (+)
PWK/PhJ	MGP_PWKPhJ_G0011703	pseudogene	Chr3:75183388-75184250 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011520	pseudogene	Chr3:76592838-76593699 (+)
WSB/EiJ	MGP_WSBEiJ_G0011889	pseudogene	Chr3:77779527-77780371 (+)

Homology

• Gene Tree
  Gm18952
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm18952
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000102341 (Evidence)
• NCBI Gene
  100418022

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102341	Ensembl Gene Model | MGI Sequence Detail	846	C57BL/6J
transcript	ENSMUST00000194471	Ensembl | MGI Sequence Detail	846	Not Applicable

References

• Summaries
  All 7

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426