Gm18711 Pseudogene Detail

Summary

• Symbol
  Gm18711
• Name
  predicted gene, 18711

• Feature Type
  pseudogene
• IDs
  MGI:5010896
  NCBI Gene: 100417606
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:53703536-53704285 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 27.38 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  45 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010896	pseudogene	Chr14:53703518-53704285 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011195	pseudogene	Chr15:73325779-73330123 (-)
A/J	no annotation
AKR/J	MGP_AKRJ_G0011064	pseudogene	Chr14:47268384-47269122 (+)
BALB/cJ	MGP_BALBcJ_G0011153	pseudogene	Chr15:70714133-70718471 (-)
C3H/HeJ	MGP_C3HHeJ_G0011052	pseudogene	Chr15:72661286-72665624 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011371	pseudogene	Chr14:49714632-49715381 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010031	pseudogene	Chr15:67132879-67137482 (-)
CAST/EiJ	MGP_CASTEiJ_G0010875	pseudogene	Chr15:73465701-73470043 (-)
CBA/J	MGP_CBAJ_G0010954	pseudogene	Chr14:50382677-50421064 (+)
DBA/2J	MGP_DBA2J_G0011002	pseudogene	Chr14:45359493-45360231 (+)
FVB/NJ	MGP_FVBNJ_G0011081	pseudogene	Chr15:69323044-69327382 (-)
LP/J	MGP_LPJ_G0011088	pseudogene	Chr14:47479766-47480495 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011076	pseudogene	Chr15:83972779-83978632 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0010665	pseudogene	Chr14:42738818-42739574 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010568	pseudogene	Chr15:72798326-72802690 (-)
WSB/EiJ	MGP_WSBEiJ_G0010922	pseudogene	Chr15:72906376-72910718 (-)

Homology

• Gene Tree
  Gm18711
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18711
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000105666 (Evidence)
• NCBI Gene
  100417606

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105666	Ensembl Gene Model | MGI Sequence Detail	750	C57BL/6J
transcript	ENSMUST00000199341	Ensembl | MGI Sequence Detail	750	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;