Gm18561 Pseudogene Detail

Summary

• Symbol
  Gm18561
• Name
  predicted gene, 18561

• Feature Type
  pseudogene
• IDs
  MGI:5010746
  NCBI Gene: 100417362
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:126754241-126755178 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 69.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  36 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010746	pseudogene	Chr7:126754241-126755178 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014012	pseudogene	Chr7:131482494-131483431 (+)
A/J	MGP_AJ_G0014031	pseudogene	Chr7:127985614-127986551 (+)
AKR/J	MGP_AKRJ_G0013965	pseudogene	Chr7:131232442-131233379 (+)
BALB/cJ	MGP_BALBcJ_G0013988	pseudogene	Chr7:127648376-127649313 (+)
C3H/HeJ	MGP_C3HHeJ_G0013823	pseudogene	Chr7:131167208-131168145 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014420	pseudogene	Chr7:136585181-136586118 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012277	pseudogene	Chr7:129196754-129197699 (+)
CAST/EiJ	MGP_CASTEiJ_G0013478	pseudogene	Chr7:122957834-122958778 (+)
CBA/J	MGP_CBAJ_G0013803	pseudogene	Chr7:141182333-141183270 (+)
DBA/2J	MGP_DBA2J_G0013880	pseudogene	Chr7:125958053-125958990 (+)
FVB/NJ	MGP_FVBNJ_G0013881	pseudogene	Chr7:125810063-125811000 (+)
LP/J	MGP_LPJ_G0013959	pseudogene	Chr7:132949604-132950541 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013907	pseudogene	Chr7:142337498-142338435 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014386	pseudogene	Chr7:130242459-130244856 (+)
PWK/PhJ	MGP_PWKPhJ_G0013293	pseudogene	Chr7:118959654-118960598 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013064	pseudogene	Chr7:117086151-117087096 (+)
WSB/EiJ	MGP_WSBEiJ_G0013540	pseudogene	Chr7:131222494-131223431 (+)

Homology

• Gene Tree
  Gm18561
  

Human Diseases

• References
  2 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  32 phenotype references
  

• All Mutations and Alleles
  26
• Gene trapped
  24
• Targeted
  2
• Genomic Mutations
  2 involving Gm18561
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108362 (Evidence)
• NCBI Gene
  100417362

Representative Sequences			Length	Strain/Species
genomic	100417362	NCBI Gene Model | MGI Sequence Detail	938	C57BL/6J

References

• Summaries
  All 35

  Diseases 2

  Phenotypes 32
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:342026 Hasegawa Y, et al., Microglial cannabinoid receptor type 1 mediates social memory deficits in mice produced by adolescent THC exposure and 16p11.2 duplication. Nat Commun. 2023 Oct 25;14(1):6559