Gm17831 Pseudogene Detail

Summary

• Symbol
  Gm17831
• Name
  predicted gene, 17831

• Feature Type
  pseudogene
• IDs
  MGI:5010016
  NCBI Gene: 100415813
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:127753191-127754090 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 70.00 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  59 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010016	pseudogene	Chr7:127752981-127758439 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014018	pseudogene	Chr7:132560201-132561104 (+)
A/J	MGP_AJ_G0014037	pseudogene	Chr7:128995436-128996335 (+)
AKR/J	MGP_AKRJ_G0013971	pseudogene	Chr7:132357600-132358499 (+)
BALB/cJ	MGP_BALBcJ_G0013994	pseudogene	Chr7:128659343-128660242 (+)
C3H/HeJ	MGP_C3HHeJ_G0013828	pseudogene	Chr7:132255377-132256276 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014426	pseudogene	Chr7:137726938-137727837 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011244	pseudogene	Chr4:39454254-39455150 (-)
CAST/EiJ	MGP_CASTEiJ_G0013483	pseudogene	Chr7:124043409-124044307 (+)
CBA/J	MGP_CBAJ_G0013809	pseudogene	Chr7:142419589-142420488 (+)
DBA/2J	MGP_DBA2J_G0013886	pseudogene	Chr7:126986011-126986910 (+)
FVB/NJ	MGP_FVBNJ_G0013887	pseudogene	Chr7:126845925-126846824 (+)
LP/J	MGP_LPJ_G0013967	pseudogene	Chr7:134036090-134036993 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013913	pseudogene	Chr7:143468808-143469707 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014393	pseudogene	Chr7:131333412-131334311 (+)
PWK/PhJ	MGP_PWKPhJ_G0013298	pseudogene	Chr7:119986664-119987566 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013070	pseudogene	Chr7:118130983-118131874 (+)
WSB/EiJ	MGP_WSBEiJ_G0013544	pseudogene	Chr7:132303944-132304843 (+)

Homology

• Gene Tree
  Gm17831
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108729 (Evidence)
• NCBI Gene
  100415813

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108729	Ensembl Gene Model | MGI Sequence Detail	900	C57BL/6J
transcript	ENSMUST00000205579	Ensembl | MGI Sequence Detail	900	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;