Ighv1-8 Pseudogene Detail

Summary

• Symbol
  Ighv1-8
• Name
  immunoglobulin heavy variable V1-8

• Feature Type
  pseudogenic gene segment
• IDs
  MGI:5009906
  NCBI Gene: 780863
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:114519230-114519522 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 62.39 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5009906	pseudogenic gene segment	Chr12:114519230-114519522 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0000218	pseudogenic gene segment	Chr12:117224482-117224774 (-)
A/J	MGP_AJ_G0000197	pseudogenic gene segment	Chr12:112747911-112748176 (-)
AKR/J	MGP_AKRJ_G0000195	pseudogenic gene segment	Chr12:116067172-116067464 (-)
BALB/cJ	MGP_BALBcJ_G0000195	pseudogenic gene segment	Chr12:113324677-113324969 (-)
C3H/HeJ	MGP_C3HHeJ_G0000191	pseudogenic gene segment	Chr12:116430606-116430898 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0000278	pseudogenic gene segment	Chr12:120870275-120870567 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0000190	pseudogenic gene segment	Chr12:111200508-111200800 (-)
CBA/J	MGP_CBAJ_G0000184	pseudogenic gene segment	Chr12:125458188-125458480 (-)
DBA/2J	MGP_DBA2J_G0000184	pseudogenic gene segment	Chr12:112319067-112319359 (-)
FVB/NJ	MGP_FVBNJ_G0000188	pseudogenic gene segment	Chr12:111014313-111014605 (-)
LP/J	MGP_LPJ_G0000226	pseudogenic gene segment	Chr12:117177841-117178133 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000195	pseudogenic gene segment	Chr12:128725292-128725584 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0000269	pseudogenic gene segment	Chr12:115443422-115443714 (-)
PWK/PhJ	MGP_PWKPhJ_G0000158	pseudogenic gene segment	Chr12:106975671-106975963 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0000145	pseudogenic gene segment	Chr12:109705063-109705328 (-)
WSB/EiJ	MGP_WSBEiJ_G0000198	pseudogenic gene segment	Chr12:116468925-116469217 (-)

Homology

• Gene Tree
  Ighv1-8
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000103667 (Evidence)
• NCBI Gene
  780863

Representative Sequences			Length	Strain/Species
genomic	780863	NCBI Gene Model | MGI Sequence Detail	293	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;