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Mir5116 Gene Detail
Summary
  • Symbol
    Mir5116
  • Name
    microRNA 5116
  • Synonyms
    mmu-mir-5116
Location &
Maps
more
  • Sequence Map
    ChrX:55633212-55633274 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 30.06 cM
Strain
Comparison
more
  • SNPs within 2kb
    52 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4950436
 miRNA gene ChrX:55633212-55633274 (-)
129S1/SvImJ ENSMUSG00200038478
 miRNA gene ChrX:37958892-37958954 (-)
A/J ENSMUSG00195017100
 miRNA gene ChrX:41393255-41393317 (-)
AKR/J ENSMUSG00220040754
 miRNA gene ChrX:37284824-37284886 (-)
BALB/cJ ENSMUSG00180034426
 miRNA gene ChrX:38025501-38025563 (-)
C3H/HeJ ENSMUSG00175042755
 miRNA gene ChrX:41551267-41551329 (-)
C57BL/6NJ ENSMUSG00215048057
 miRNA gene ChrX:38217452-38217514 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0008342
 miRNA gene ChrX:51519721-51519783 (-)
CAST/EiJ ENSTCUG00005039004
 miRNA gene ChrX:39868014-39868076 (-)
CBA/J ENSMUSG00210041459
 miRNA gene ChrX:38388169-38388231 (-)
DBA/2J ENSMUSG00185035609
 miRNA gene ChrX:50705627-50705689 (-)
FVB/NJ ENSMUSG00205032527
 miRNA gene ChrX:38051671-38051733 (-)
JF1/MsJ ENSUMUG00000030051
 miRNA gene ChrX:71595458-71595520 (-)
LP/J ENSMUSG00230030313
 miRNA gene ChrX:57235837-57235899 (-)
NOD/ShiLtJ ENSMUSG00190039790
 miRNA gene ChrX:37718325-37718387 (-)
NZO/HlLtJ ENSMUSG00225032615
 miRNA gene ChrX:62476829-62476891 (-)
PWK/PhJ ENSLUMG00010042140
 miRNA gene ChrX:37550774-37550836 (-)
SPRET/EiJ ENSMSPG00010024860
 miRNA gene ChrX:40078883-40078945 (-)
WSB/EiJ ENSIUOG00005047608
 miRNA gene ChrX:38669655-38669717 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100628628 NCBI Gene Model | MGI Sequence Detail 63 C57BL/6J ±  kb
transcript NR_039576 RefSeq | MGI Sequence Detail 63 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0018025
References
more
  • Summaries
    All 5
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/06/2026
MGI 6.29 		The Jackson Laboratory