Mir5101 Gene Detail

Summary

• Symbol
  Mir5101
• Name
  microRNA 5101
• Synonyms
  mmu-mir-5101

• Feature Type
  miRNA gene
• IDs
  MGI:4950421
  NCBI Gene: 100628610
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:75955877-75955959 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 33.27 cM

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4950421	miRNA gene	Chr12:75955877-75955959 (+)
129S1/SvImJ	ENSMUSG00200033334	miRNA gene	Chr12:67900641-67900720 (+)
A/J	ENSMUSG00195015289	miRNA gene	Chr12:70613292-70613374 (+)
AKR/J	ENSMUSG00220015438	miRNA gene	Chr12:68378704-68378783 (+)
BALB/cJ	ENSMUSG00180035672	miRNA gene	Chr12:69574269-69574351 (+)
C3H/HeJ	ENSMUSG00175045370	miRNA gene	Chr12:72733013-72733095 (+)
C57BL/6NJ	ENSMUSG00215035342	miRNA gene	Chr12:68952397-68952479 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007217	miRNA gene	Chr12:70450182-70450280 (+)
CAST/EiJ	ENSTCUG00005036102	miRNA gene	Chr12:68930736-68930818 (+)
CBA/J	ENSMUSG00210031793	miRNA gene	Chr12:69160477-69160559 (+)
DBA/2J	ENSMUSG00185043644	miRNA gene	Chr12:71031765-71031844 (+)
FVB/NJ	ENSMUSG00205037101	miRNA gene	Chr12:68782656-68782738 (+)
JF1/MsJ	ENSUMUG00000023545	miRNA gene	Chr12:75065420-75065502 (+)
LP/J	ENSMUSG00230022515	miRNA gene	Chr12:78024418-78024497 (+)
NOD/ShiLtJ	ENSMUSG00190013309	miRNA gene	Chr12:68210976-68211055 (+)
NZO/HlLtJ	ENSMUSG00225039042	miRNA gene	Chr12:80086322-80086404 (+)
PWK/PhJ	ENSLUMG00010033452	miRNA gene	Chr12:69095185-69095267 (+)
SPRET/EiJ	ENSMSPG00010029814	miRNA gene	Chr12:70864272-70864354 (+)
WSB/EiJ	ENSIUOG00005012500	miRNA gene	Chr12:68846015-68846097 (+)

Homology

• Gene Tree
  Mir5101
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir5101
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000092922 (Evidence)
• NCBI Gene
  100628610

Representative Sequences			Length	Strain/Species
genomic	100628610	NCBI Gene Model | MGI Sequence Detail	83	C57BL/6J
transcript	NR_039560	RefSeq | MGI Sequence Detail	83	ZRU/MplStud

Other Database
Links

miRBase

MI0018009

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4