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Mir3961 Gene Detail
Summary
  • Symbol
    Mir3961
  • Name
    microRNA 3961
  • Synonyms
    mmu-mir-3961
Location &
Maps
more
  • Sequence Map
    Chr13:82846394-82846452 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 43.68 cM
Strain
Comparison
more
  • SNPs within 2kb
    144 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4950395
 miRNA gene Chr13:82846394-82846452 (-)
129S1/SvImJ ENSMUSG00200006007
 miRNA gene Chr13:77301792-77301850 (-)
A/J ENSMUSG00195025655
 miRNA gene Chr13:77809677-77809735 (-)
AKR/J ENSMUSG00220016610
 miRNA gene Chr13:76349959-76350017 (-)
BALB/cJ ENSMUSG00180001451
 miRNA gene Chr13:78306538-78306596 (-)
C3H/HeJ ENSMUSG00175019409
 miRNA gene Chr13:78560367-78560425 (-)
C57BL/6NJ ENSMUSG00215002525
 miRNA gene Chr13:78426265-78426323 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007343
 miRNA gene Chr13:77010030-77010088 (-)
CAST/EiJ ENSTCUG00005004121
 miRNA gene Chr13:77752779-77752837 (-)
CBA/J ENSMUSG00210005879
 miRNA gene Chr13:77850452-77850510 (-)
DBA/2J ENSMUSG00185010551
 miRNA gene Chr13:81530678-81530736 (-)
FVB/NJ ENSMUSG00205013164
 miRNA gene Chr13:77303691-77303749 (-)
JF1/MsJ ENSUMUG00000034778
 miRNA gene Chr13:81280528-81280586 (-)
LP/J ENSMUSG00230004468
 miRNA gene Chr13:91515754-91515812 (-)
NOD/ShiLtJ ENSMUSG00190008702
 miRNA gene Chr13:77865115-77865173 (-)
NZO/HlLtJ ENSMUSG00225030695
 miRNA gene Chr13:84034257-84034315 (-)
PWK/PhJ ENSLUMG00010014377
 miRNA gene Chr13:77414326-77414384 (-)
SPRET/EiJ ENSMSPG00010001349
 miRNA gene Chr13:78340924-78340982 (-)
WSB/EiJ ENSIUOG00005017524
 miRNA gene Chr13:77129445-77129503 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100628621 NCBI Gene Model | MGI Sequence Detail 59 C57BL/6J ±  kb
transcript NR_039537 RefSeq | MGI Sequence Detail 59 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0016965
References
more
  • Summaries
    All 8
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory