Gm17150 Pseudogene Detail

Summary

• Symbol
  Gm17150
• Name
  predicted gene 17150

• Feature Type
  pseudogene
• IDs
  MGI:4937977
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:58778627-58779007 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 54.51 cM

Strain
Comparison

• SNPs within 2kb
  28 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937977	pseudogene	Chr19:58778627-58779007 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011501	pseudogene	Chr19:59278656-59279036 (+)
A/J	MGP_AJ_G0011496	pseudogene	Chr19:56379861-56380241 (+)
AKR/J	MGP_AKRJ_G0011461	pseudogene	Chr19:58139405-58141543 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0011364	pseudogene	Chr19:58391551-58392072 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011767	pseudogene	Chr19:60710348-60710728 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010309	pseudogene	Chr19:55252792-55253170 (+)
CAST/EiJ	MGP_CASTEiJ_G0011161	pseudogene	Chr19:58466214-58466592 (+)
CBA/J	MGP_CBAJ_G0011333	pseudogene	Chr19:63673806-63675594 (+)
DBA/2J	MGP_DBA2J_G0011390	pseudogene	Chr19:56122679-56123059 (+)
FVB/NJ	MGP_FVBNJ_G0011395	pseudogene	Chr19:55859769-55860152 (+)
LP/J	MGP_LPJ_G0011457	pseudogene	Chr19:59143252-59145316 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011390	pseudogene	Chr19:62915825-62916205 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011754	pseudogene	Chr19:58369827-58370207 (+)
PWK/PhJ	MGP_PWKPhJ_G0011019	pseudogene	Chr19:56127644-56128022 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010847	pseudogene	Chr19:57035831-57036213 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm17150
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000091410 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091410	Ensembl Gene Model | MGI Sequence Detail	381	C57BL/6J
transcript	ENSMUST00000165577	Ensembl | MGI Sequence Detail	381	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;