Gm17105 Gene Detail

Summary

• Symbol
  Gm17105
• Name
  predicted gene 17105

• Feature Type
  lncRNA gene
• IDs
  MGI:4937932
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:24288240-24293459 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 14.31 cM

Strain
Comparison

• SNPs within 2kb
  32 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937932	lncRNA gene	Chr14:24288240-24293459 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0036909	sense intronic lncRNA gene	Chr14:17157701-17164690 (-)
A/J	MGP_AJ_G0036897	sense intronic lncRNA gene	Chr14:16706413-16711606 (-)
AKR/J	MGP_AKRJ_G0036844	sense intronic lncRNA gene	Chr14:17308124-17313328 (-)
BALB/cJ	MGP_BALBcJ_G0036888	sense intronic lncRNA gene	Chr14:16827274-16832449 (-)
C3H/HeJ	MGP_C3HHeJ_G0036573	sense intronic lncRNA gene	Chr14:17284240-17290501 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037401	sense intronic lncRNA gene	Chr14:17716846-17722039 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034461	sense intronic lncRNA gene	Chr14:16978512-16983730 (-)
CAST/EiJ	MGP_CASTEiJ_G0035762	sense intronic lncRNA gene	Chr14:17119599-17124836 (-)
CBA/J	MGP_CBAJ_G0036548	sense intronic lncRNA gene	Chr14:18591989-18597173 (-)
DBA/2J	MGP_DBA2J_G0036725	sense intronic lncRNA gene	Chr14:16520718-16525893 (-)
FVB/NJ	MGP_FVBNJ_G0036676	sense intronic lncRNA gene	Chr14:16405284-16410754 (-)
LP/J	MGP_LPJ_G0036771	sense intronic lncRNA gene	Chr14:17410699-17415902 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036682	sense intronic lncRNA gene	Chr14:18298523-18305087 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037517	sense intronic lncRNA gene	Chr14:17141711-17148174 (-)
PWK/PhJ	MGP_PWKPhJ_G0035456	sense intronic lncRNA gene	Chr14:16152814-16157999 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035267	sense intronic lncRNA gene	Chr14:16959389-16965715 (-)
WSB/EiJ	MGP_WSBEiJ_G0035962	sense intronic lncRNA gene	Chr14:17135302-17140498 (-)

Homology

• Gene Tree
  Gm17105
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000091079 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091079	Ensembl Gene Model | MGI Sequence Detail	5220	C57BL/6J
transcript	ENSMUST00000163715	Ensembl | MGI Sequence Detail	652	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;