Gm17094 Gene Detail

Summary

• Symbol
  Gm17094
• Name
  predicted gene 17094

• Feature Type
  lncRNA gene
• IDs
  MGI:4937921
  NCBI Gene: 102637035
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:39400007-39420690 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 20.13 cM

Strain
Comparison

• SNPs within 2kb
  169 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937921	lncRNA gene	Chr4:39398045-39450249 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003884	antisense lncRNA gene	Chr4:37233638-37283854 (-)
A/J	MGP_AJ_G0003864	antisense lncRNA gene	Chr4:35853917-35908142 (-)
AKR/J	MGP_AKRJ_G0003841	antisense lncRNA gene	Chr4:36727352-36781398 (-)
BALB/cJ	MGP_BALBcJ_G0003851	antisense lncRNA gene	Chr4:36169618-36220267 (-)
C3H/HeJ	MGP_C3HHeJ_G0003796	antisense lncRNA gene	Chr4:37307769-37359996 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003995	antisense lncRNA gene	Chr4:38636577-38697488 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0003762	antisense lncRNA gene	Chr4:36959199-37020846 (-)
CBA/J	MGP_CBAJ_G0003790	antisense lncRNA gene	Chr4:39929367-39994475 (-)
DBA/2J	MGP_DBA2J_G0003805	antisense lncRNA gene	Chr4:35747656-35799940 (-)
FVB/NJ	MGP_FVBNJ_G0003825	antisense lncRNA gene	Chr4:35123600-35175956 (-)
LP/J	MGP_LPJ_G0003886	antisense lncRNA gene	Chr4:37321458-37376318 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003813	antisense lncRNA gene	Chr4:43321820-43384344 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003994	antisense lncRNA gene	Chr4:36831630-36884334 (-)
PWK/PhJ	MGP_PWKPhJ_G0003718	antisense lncRNA gene	Chr4:35773804-35828133 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003663	antisense lncRNA gene	Chr4:36597266-36646978 (-)
WSB/EiJ	MGP_WSBEiJ_G0003798	antisense lncRNA gene	Chr4:36861771-36917350 (-)

Homology

• Gene Tree
  Gm17094
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Gm17094
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000090839 (Evidence)
• NCBI Gene
  102637035

Representative Sequences			Length	Strain/Species
genomic	102637035	NCBI Gene Model | MGI Sequence Detail	20684	C57BL/6J
transcript	AK133305	GenBank | ENA | DDBJ | MGI Sequence Detail	3336	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:192799 Cattanach BM, et al., A further duplication involving chromosome 4, Dp(4)20H. Mouse Genome. 1996;94(3):680
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;