Gm17072 Pseudogene Detail

Summary

• Symbol
  Gm17072
• Name
  predicted gene 17072

• Feature Type
  pseudogene
• IDs
  MGI:4937899
  NCBI Gene: 100417496
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:82554327-82554984 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 39.06 cM

Strain
Comparison

• SNPs within 2kb
  60 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937899	pseudogene	Chr8:82554305-82554985 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014091	pseudogene	Chr8:82596505-82598121 (+)
A/J	MGP_AJ_G0014112	pseudogene	Chr8:79352703-79354316 (+)
AKR/J	MGP_AKRJ_G0014039	pseudogene	Chr8:81698025-81699641 (+)
BALB/cJ	MGP_BALBcJ_G0014066	pseudogene	Chr8:79462322-79463938 (+)
C3H/HeJ	MGP_C3HHeJ_G0013896	pseudogene	Chr8:82335248-82336861 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014505	pseudogene	Chr8:85785063-85786675 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012340	pseudogene	Chr8:73278043-73279701 (+)
CAST/EiJ	MGP_CASTEiJ_G0013554	pseudogene	Chr8:81723055-81724673 (+)
CBA/J	MGP_CBAJ_G0013878	pseudogene	Chr8:88816510-88818123 (+)
DBA/2J	MGP_DBA2J_G0013955	pseudogene	Chr8:79028113-79029726 (+)
FVB/NJ	MGP_FVBNJ_G0013958	pseudogene	Chr8:77938200-77939812 (+)
LP/J	MGP_LPJ_G0014042	pseudogene	Chr8:82693016-82694632 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013985	pseudogene	Chr8:91312880-91314496 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014483	pseudogene	Chr8:81708569-81710185 (+)
PWK/PhJ	MGP_PWKPhJ_G0013364	pseudogene	Chr8:78255710-78257322 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013147	pseudogene	Chr8:80491996-80493610 (+)
WSB/EiJ	MGP_WSBEiJ_G0013613	pseudogene	Chr8:82073248-82074861 (+)

Homology

• Gene Tree
  Gm17072
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm17072
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000091998 (Evidence)
• NCBI Gene
  100417496

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091998	Ensembl Gene Model | MGI Sequence Detail	658	C57BL/6J
transcript	ENSMUST00000166673	Ensembl | MGI Sequence Detail	658	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;