Gm17066 Gene Detail

Summary

• Symbol
  Gm17066
• Name
  predicted gene 17066

• Feature Type
  lncRNA gene
• IDs
  MGI:4937893
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr14:105346826-105352112 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 55.37 cM

Strain
Comparison

• SNPs within 2kb
  38 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937893	lncRNA gene	Chr14:105346826-105352112 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015280	unclassified non-coding RNA gene	Chr14:101685300-101690687 (-)
A/J	MGP_AJ_G0015254	unclassified non-coding RNA gene	Chr14:98319577-98324863 (-)
AKR/J	MGP_AKRJ_G0015217	unclassified non-coding RNA gene	Chr14:101256408-101261693 (-)
BALB/cJ	MGP_BALBcJ_G0015218	unclassified non-coding RNA gene	Chr14:98671547-98676833 (-)
C3H/HeJ	MGP_C3HHeJ_G0015042	unclassified non-coding RNA gene	Chr14:101185368-101190654 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015673	unclassified non-coding RNA gene	Chr14:105789609-105794895 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013414	unclassified non-coding RNA gene	Chr14:95100160-95105485 (-)
CAST/EiJ	MGP_CASTEiJ_G0014593	unclassified non-coding RNA gene	Chr14:98512512-98517796 (-)
CBA/J	MGP_CBAJ_G0015022	unclassified non-coding RNA gene	Chr14:109560444-109565730 (-)
DBA/2J	MGP_DBA2J_G0015116	unclassified non-coding RNA gene	Chr14:97814756-97820035 (-)
FVB/NJ	MGP_FVBNJ_G0015123	unclassified non-coding RNA gene	Chr14:96772148-96777437 (-)
LP/J	MGP_LPJ_G0015196	unclassified non-coding RNA gene	Chr14:102501340-102506618 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0015712	unclassified non-coding RNA gene	Chr14:100784337-100789623 (-)
PWK/PhJ	MGP_PWKPhJ_G0014385	unclassified non-coding RNA gene	Chr14:94782492-94787854 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014172	unclassified non-coding RNA gene	Chr14:96788298-96793515 (-)
WSB/EiJ	MGP_WSBEiJ_G0014700	unclassified non-coding RNA gene	Chr14:101421533-101426818 (-)

Homology

• Gene Tree
  Gm17066
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm17066
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000091509 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091509	Ensembl Gene Model | MGI Sequence Detail	5287	C57BL/6J
transcript	ENSMUST00000165350	Ensembl | MGI Sequence Detail	1113	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:67314 Roix J, et al., Molecular and functional mapping of the piebald deletion complex on mouse chromosome 14. Genetics. 2001 Feb;157(2):803-15

TSS for Gm17066:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr130149	Chr14:105352746-105352760 (-)	-641 bp
Tssr130148	Chr14:105352056-105352190 (-)	-11 bp