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Pate10 Gene Detail
Summary
  • Symbol
    Pate10
  • Name
    prostate and testis expressed 10
  • Synonyms
    Gm17677
  • Feature Type
    protein coding gene
  • IDs
    MGI:4937311
    NCBI Gene: 100312949
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:35741049-35742252 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 20.42 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    18 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4937311
 protein coding gene Chr9:35740960-35742570 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034543
 protein coding gene Chr9:33553017-33554220 (+)
A/J MGP_AJ_G0034521
 protein coding gene Chr9:32701939-32703142 (+)
AKR/J MGP_AKRJ_G0034447
 protein coding gene Chr9:33423647-33424848 (+)
BALB/cJ MGP_BALBcJ_G0034512
 protein coding gene Chr9:32603176-32604379 (+)
C3H/HeJ MGP_C3HHeJ_G0034224
 protein coding gene Chr9:33763415-33764618 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035033
 protein coding gene Chr9:34685698-34686901 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031963
 protein coding gene Chr9:31354166-31355360 (+)
CAST/EiJ MGP_CASTEiJ_G0033547
 protein coding gene Chr9:33658132-33659337 (+)
CBA/J MGP_CBAJ_G0034198
 protein coding gene Chr9:35849980-35851182 (+)
DBA/2J MGP_DBA2J_G0034355
 protein coding gene Chr9:32672185-32673386 (+)
FVB/NJ MGP_FVBNJ_G0034298
 protein coding gene Chr9:32086390-32087593 (+)
LP/J MGP_LPJ_G0034441
 protein coding gene Chr9:33812279-33813484 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034342
 protein coding gene Chr9:37435165-37436366 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035053
 protein coding gene Chr9:33378069-33379274 (+)
PWK/PhJ MGP_PWKPhJ_G0033252
 protein coding gene Chr9:32659104-32660306 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033087
 protein coding gene Chr9:33653337-33654537 (+)
WSB/EiJ MGP_WSBEiJ_G0033662
 protein coding gene Chr9:33153518-33154719 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    631
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091174 Ensembl Gene Model | MGI Sequence Detail 1204 C57BL/6J ±  kb
transcript ENSMUST00000166746 Ensembl | MGI Sequence Detail 351 Not Applicable  
polypeptide ENSMUSP00000132657 Ensembl | MGI Sequence Detail 116 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
References
more
  • Summaries
    All 8
  • Earliest
    J:138601 Levitin F, et al., PATE gene clusters code for multiple, secreted TFP/Ly-6/uPAR proteins that are expressed in reproductive and neuron-rich tissues and possess neuromodulatory activity. J Biol Chem. 2008 Jun 13;283(24):16928-39
  • Latest
    J:270449 Loughner CL, et al., Organization, evolution and functions of the human and mouse Ly6/uPAR family genes. Hum Genomics. 2016 Apr 21;10:10
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/16/2021
MGI 6.16 		The Jackson Laboratory