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Ighd5-6 Pseudogene Detail
Summary
  • Symbol
    Ighd5-6
  • Name
    immunoglobulin heavy diversity 5-6
  • Synonyms
    Gm17600
Location &
Maps
more
  • Sequence Map
    Chr12:113413208-113413217 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 62.10 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4937234
 pseudogenic gene segment Chr12:113413208-113413219 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J MGP_AKRJ_G0000019
 gene segment Chr12:114760219-114760230 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0000019
 gene segment Chr12:115231346-115231355 (-)
C57BL/6NJ MGP_C57BL6NJ_G0000019
 gene segment Chr12:119504075-119504086 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0000018
 gene segment Chr12:124113417-124113428 (-)
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0000018
 gene segment Chr12:127209438-127209449 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000017
 gene segment Chr12:68532183-68532194 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0000021
 gene segment Chr12:115211803-115211814 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    14
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 777663 NCBI Gene Model | MGI Sequence Detail 10 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory