Gm17572 Pseudogene Detail

Summary

• Symbol
  Gm17572
• Name
  predicted gene, 17572

• Feature Type
  pseudogene
• IDs
  MGI:4937206
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:32169508-32169915 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 17.26 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  25 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937206	pseudogene	Chr17:32169508-32169915 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011338	pseudogene	Chr17:31759534-31759953 (+)
A/J	MGP_AJ_G0011325	pseudogene	Chr17:30711929-30712470 (+)
AKR/J	MGP_AKRJ_G0011289	pseudogene	Chr17:30987376-30987795 (+)
BALB/cJ	MGP_BALBcJ_G0011300	pseudogene	Chr17:30787854-30788273 (+)
C3H/HeJ	MGP_C3HHeJ_G0011190	pseudogene	Chr17:31358093-31358512 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011591	pseudogene	Chr17:32862914-32863333 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009453	pseudogene	Chr10:110353947-110354363 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011170	pseudogene	Chr17:34264471-34264890 (+)
DBA/2J	MGP_DBA2J_G0011223	pseudogene	Chr17:30097443-30097862 (+)
FVB/NJ	MGP_FVBNJ_G0011223	pseudogene	Chr17:29916611-29917030 (+)
LP/J	MGP_LPJ_G0011305	pseudogene	Chr17:31969393-31969812 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011219	pseudogene	Chr17:33350416-33350835 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011570	pseudogene	Chr17:31351282-31351701 (+)
PWK/PhJ	MGP_PWKPhJ_G0010883	pseudogene	Chr17:28977536-28977950 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010706	pseudogene	Chr17:29335099-29335518 (+)
WSB/EiJ	MGP_WSBEiJ_G0011051	pseudogene	Chr17:31321228-31321647 (+)

Homology

• Gene Tree
  Gm17572
  

Human Diseases

• References
  2 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  17 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  2
• Genomic Mutations
  2 involving Gm17572
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000091548 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091548	Ensembl Gene Model | MGI Sequence Detail	408	C57BL/6J
transcript	ENSMUST00000171455	Ensembl | MGI Sequence Detail	408	Not Applicable

References

• Summaries
  All 18

  Diseases 2

  Phenotypes 17
• Earliest
  J:161325 Yu T, et al., A mouse model of Down syndrome trisomic for all human chromosome 21 syntenic regions. Hum Mol Genet. 2010 Jul 15;19(14):2780-91
• Latest
  J:341136 Muza PM, et al., Cognitive impairments in a Down syndrome model with abnormal hippocampal and prefrontal dynamics and cytoarchitecture. iScience. 2023 Feb 17;26(2):106073