Gm17529 Gene Detail

Summary

• Symbol
  Gm17529
• Name
  predicted gene, 17529

• Feature Type
  lncRNA gene
• IDs
  MGI:4937163
  NCBI Gene: 100504043
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:58999875-59014797 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 25.97 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  162 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937163	lncRNA gene	Chr12:58999875-59014797 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005362	lincRNA gene	Chr12:58144269-58160243 (+)
A/J	MGP_AJ_G0005345	lincRNA gene	Chr12:56032701-56047663 (+)
AKR/J	MGP_AKRJ_G0005325	lincRNA gene	Chr12:57811177-57826416 (+)
BALB/cJ	MGP_BALBcJ_G0005327	lincRNA gene	Chr12:56413440-56430056 (+)
C3H/HeJ	MGP_C3HHeJ_G0005276	lincRNA gene	Chr12:57911653-57927676 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005481	lincRNA gene	Chr12:59848570-59865541 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004868	lincRNA gene	Chr12:54408421-54423981 (+)
CAST/EiJ	MGP_CASTEiJ_G0005223	lincRNA gene	Chr12:52801311-52817406 (+)
CBA/J	MGP_CBAJ_G0005265	lincRNA gene	Chr12:62044866-62065145 (+)
DBA/2J	MGP_DBA2J_G0005283	lincRNA gene	Chr12:55948095-55964275 (+)
FVB/NJ	MGP_FVBNJ_G0005308	lincRNA gene	Chr12:55214663-55229806 (+)
LP/J	MGP_LPJ_G0005364	lincRNA gene	Chr12:58184782-58199130 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005290	lincRNA gene	Chr12:63663305-63678967 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005483	lincRNA gene	Chr12:57257285-57273287 (+)
PWK/PhJ	MGP_PWKPhJ_G0005172	lincRNA gene	Chr12:50311476-50327439 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005092	lincRNA gene	Chr12:51655856-51676757 (+)
WSB/EiJ	MGP_WSBEiJ_G0005271	lincRNA gene	Chr12:57822998-57839289 (+)

Homology

• Gene Tree
  Gm17529
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm17529
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000097443 (Evidence)
• NCBI Gene
  100504043

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097443	Ensembl Gene Model | MGI Sequence Detail	14923	C57BL/6J
transcript	ENSMUST00000180738	Ensembl | MGI Sequence Detail	3093	Not Applicable

References

• Summaries
  All 5

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;