Gm17430 Pseudogene Detail

Summary

• Symbol
  Gm17430
• Name
  predicted gene, 17430

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:4937064
  NCBI Gene: 118568368
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:9726205-9726670 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 4.91 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  28 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937064	pseudogene	Chr18:9726117-9726734 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0024143	protein coding gene	Chr18:6640389-6640862 (-)
A/J	MGP_AJ_G0024105	protein coding gene	Chr18:6608202-6608675 (-)
AKR/J	MGP_AKRJ_G0024072	protein coding gene	Chr18:6769714-6770187 (-)
BALB/cJ	MGP_BALBcJ_G0024104	protein coding gene	Chr18:6582975-6583448 (-)
C3H/HeJ	MGP_C3HHeJ_G0023871	protein coding gene	Chr18:6662147-6662620 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0024549	protein coding gene	Chr18:7049640-7050113 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0021988	protein coding gene	Chr18:6150582-6151056 (-)
CAST/EiJ	MGP_CASTEiJ_G0023348	protein coding gene	Chr18:6622968-6623441 (-)
CBA/J	MGP_CBAJ_G0023843	protein coding gene	Chr18:7050103-7050576 (-)
DBA/2J	MGP_DBA2J_G0023972	protein coding gene	Chr18:6456515-6456988 (-)
FVB/NJ	MGP_FVBNJ_G0023937	protein coding gene	Chr18:6419585-6420058 (-)
LP/J	MGP_LPJ_G0024055	protein coding gene	Chr18:6727360-6727833 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0023966	protein coding gene	Chr18:7237332-7237805 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0024595	protein coding gene	Chr18:6589941-6590414 (-)
PWK/PhJ	MGP_PWKPhJ_G0023093	protein coding gene	Chr18:6491957-6492553 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0022904	protein coding gene	Chr18:6895072-6895545 (-)
WSB/EiJ	MGP_WSBEiJ_G0023414	protein coding gene	Chr18:6581059-6581532 (-)

Homology

• Gene Tree
  Gm17430
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  6 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000091285 (Evidence)
• NCBI Gene
  118568368

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091285	Ensembl Gene Model | MGI Sequence Detail	466	C57BL/6J
transcript	ENSMUST00000171339	Ensembl | MGI Sequence Detail	466	Not Applicable
polypeptide	XP_036017239	RefSeq | MGI Sequence Detail	162	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;