Gm17409 Gene Detail

Summary

• Symbol
  Gm17409
• Name
  predicted gene, 17409

• Feature Type
  protein coding gene
• IDs
  MGI:4937043
  NCBI Gene: 100579148
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:58360128-58361089 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 33.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  46 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4937043	protein coding gene	Chr2:58360128-58361089 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0025750	protein coding gene	Chr2:58012089-58013051 (+)
A/J	MGP_AJ_G0025726	protein coding gene	Chr2:55784822-55785784 (+)
AKR/J	MGP_AKRJ_G0025696	protein coding gene	Chr2:57320892-57321854 (+)
BALB/cJ	MGP_BALBcJ_G0025721	protein coding gene	Chr2:55899565-55900526 (+)
C3H/HeJ	MGP_C3HHeJ_G0025482	protein coding gene	Chr2:57416270-57417232 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0026168	protein coding gene	Chr2:59765930-59766891 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0023573	protein coding gene	Chr2:53373409-53374372 (+)
CAST/EiJ	MGP_CASTEiJ_G0024947	protein coding gene	Chr2:57434408-57435370 (+)
CBA/J	MGP_CBAJ_G0025462	protein coding gene	Chr2:61997605-61998567 (+)
DBA/2J	MGP_DBA2J_G0025593	protein coding gene	Chr2:55406581-55407543 (+)
FVB/NJ	MGP_FVBNJ_G0025555	protein coding gene	Chr2:54938050-54939012 (+)
LP/J	MGP_LPJ_G0025681	protein coding gene	Chr2:57887373-57888334 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0025586	protein coding gene	Chr2:63704554-63705516 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0026225	protein coding gene	Chr2:57327509-57328471 (+)
PWK/PhJ	MGP_PWKPhJ_G0024688	protein coding gene	Chr2:55221958-55222919 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0024494	protein coding gene	Chr2:57423649-57424615 (+)
WSB/EiJ	MGP_WSBEiJ_G0025014	protein coding gene	Chr2:57613612-57614574 (+)

Homology

• Gene Tree
  Gm17409
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm17409
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• UniProt
  1

• Ensembl
  ENSMUSG00000091922 (Evidence)
• NCBI Gene
  100579148

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091922	Ensembl Gene Model | MGI Sequence Detail	962	C57BL/6J
transcript	AK131764	GenBank | ENA | DDBJ | MGI Sequence Detail	963	C57BL/6J
polypeptide	Q3V2J7	UniProt | EBI | MGI Sequence Detail	35	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;