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Trav9d-4 Gene Detail
Summary
  • Symbol
    Trav9d-4
  • Name
    T cell receptor alpha variable 9D-4
  • Feature Type
    gene segment
  • IDs
    MGI:4889087
    NCBI Gene: 667574
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr14:52983456-52983770 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 27.17 cM
Strain
Comparison
more
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4889087
gene segment Chr14:52983201-52983860 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002536
gene segment Chr14:46922739-47180057 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0002508
gene segment Chr14:46172858-46541796 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0002636
gene segment Chr14:49420695-49421388 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0002471
gene segment Chr14:50370303-50821208 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002629
gene segment Chr14:46711163-46711854 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0002445
gene segment Chr10:32549202-32549852 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 667574 NCBI Gene Model | MGI Sequence Detail 315 C57BL/6J ±  kb
transcript BC139214 GenBank | EMBL | DDBJ | MGI Sequence Detail 1601 Not Specified  
polypeptide A0A0G2JG37 UniProt | EBI | MGI Sequence Detail 103 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less

  • Microarray probesets 2
References
more
  • Summaries
    All 6
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory