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Mir3109 Gene Detail
Summary
  • Symbol
    Mir3109
  • Name
    microRNA 3109
  • Synonyms
    mmu-mir-3109
Location &
Maps
more
  • Sequence Map
    Chr9:69364226-69364313 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 38.58 cM
Strain
Comparison
more
  • SNPs within 2kb
    108 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4834328
 miRNA gene Chr9:69364226-69364313 (+)
129S1/SvImJ ENSMUSG00200044226
 miRNA gene Chr9:66453077-66453164 (+)
A/J ENSMUSG00195026918
 miRNA gene Chr9:66231307-66231394 (+)
AKR/J ENSMUSG00220041816
 miRNA gene Chr9:66375723-66375810 (+)
BALB/cJ ENSMUSG00180017964
 miRNA gene Chr9:66351206-66351293 (+)
C3H/HeJ ENSMUSG00175013680
 miRNA gene Chr9:66364680-66364767 (+)
C57BL/6NJ ENSMUSG00215035172
 miRNA gene Chr9:66307583-66307670 (+)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005031941
 miRNA gene Chr9:66176213-66176300 (+)
CBA/J ENSMUSG00210014850
 miRNA gene Chr9:66445441-66445528 (+)
DBA/2J ENSMUSG00185035148
 miRNA gene Chr9:66469156-66469243 (+)
FVB/NJ ENSMUSG00205032847
 miRNA gene Chr9:66743295-66743382 (+)
JF1/MsJ ENSUMUG00000038589
 miRNA gene Chr9:66489572-66489659 (+)
LP/J ENSMUSG00230027798
 miRNA gene Chr9:66648267-66648354 (+)
NOD/ShiLtJ ENSMUSG00190024225
 miRNA gene Chr9:66572178-66572265 (+)
NZO/HlLtJ ENSMUSG00225046832
 miRNA gene Chr9:66769299-66769386 (+)
PWK/PhJ ENSLUMG00010027564
 miRNA gene Chr9:66440333-66440420 (+)
SPRET/EiJ ENSMSPG00010021833
 miRNA gene Chr9:67531002-67531089 (+)
WSB/EiJ ENSIUOG00005027024
 miRNA gene Chr9:65925996-65926083 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100526560 NCBI Gene Model | MGI Sequence Detail 88 C57BL/6J ±  kb
transcript NR_037296 RefSeq | MGI Sequence Detail 88 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0014106
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory