Mir3093 Gene Detail

Summary

• Symbol
  Mir3093
• Name
  microRNA 3093
• Synonyms
  mmu-mir-3093

• Feature Type
  miRNA gene
• IDs
  MGI:4834307
  NCBI Gene: 100526540
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:88122478-88122564 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 38.78 cM

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4834307	miRNA gene	Chr3:88122478-88122564 (+)
129S1/SvImJ	ENSMUSG00200039655	miRNA gene	Chr3:84977342-84977428 (+)
A/J	ENSMUSG00195053373	miRNA gene	Chr3:84999003-84999089 (+)
AKR/J	ENSMUSG00220051800	miRNA gene	Chr3:84947084-84947170 (+)
BALB/cJ	ENSMUSG00180049180	miRNA gene	Chr3:85116723-85116809 (+)
C3H/HeJ	ENSMUSG00175048348	miRNA gene	Chr3:84932021-84932107 (+)
C57BL/6NJ	ENSMUSG00215050756	miRNA gene	Chr3:85365048-85365134 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007811	miRNA gene	Chr3:80989318-80989405 (+)
CAST/EiJ	ENSTCUG00005048675	miRNA gene	Chr3:84453384-84453470 (+)
CBA/J	ENSMUSG00210048682	miRNA gene	Chr3:85069722-85069808 (+)
DBA/2J	ENSMUSG00185053624	miRNA gene	Chr3:85205370-85205456 (+)
FVB/NJ	ENSMUSG00205051328	miRNA gene	Chr3:83993877-83993963 (+)
JF1/MsJ	ENSUMUG00000051379	miRNA gene	Chr3:84743624-84743710 (+)
LP/J	ENSMUSG00230037338	miRNA gene	Chr3:87198733-87198819 (+)
NOD/ShiLtJ	ENSMUSG00190050910	miRNA gene	Chr3:85446112-85446198 (+)
NZO/HlLtJ	ENSMUSG00225008295	miRNA gene	Chr3:89954302-89954388 (+)
PWK/PhJ	ENSLUMG00010052440	miRNA gene	Chr3:84833883-84833969 (+)
SPRET/EiJ	ENSMSPG00010050235	miRNA gene	Chr3:85674213-85674299 (+)
WSB/EiJ	ENSIUOG00005050949	miRNA gene	Chr3:85446095-85446181 (+)

Homology

• Gene Tree
  Mir3093
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Mir3093
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000092988 (Evidence)
• NCBI Gene
  100526540

Representative Sequences			Length	Strain/Species
genomic	100526540	NCBI Gene Model | MGI Sequence Detail	87	C57BL/6J
transcript	NR_037276	RefSeq | MGI Sequence Detail	87	ZRU/MplStud

Other Database
Links

miRBase

MI0014086

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Mir3093:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr29926	Chr3:88121781-88121798 (+)	-688 bp