Mir3078 Gene Detail

Summary

• Symbol
  Mir3078
• Name
  microRNA 3078
• Synonyms
  mmu-mir-3078

• Feature Type
  miRNA gene
• IDs
  MGI:4834251
  NCBI Gene: 100526520
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:64828634-64828720 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 33.77 cM

Strain
Comparison

• SNPs within 2kb
  46 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4834251	miRNA gene	Chr14:64828634-64828720 (+)
129S1/SvImJ	ENSMUSG00200030603	miRNA gene	Chr14:53439937-53440023 (+)
A/J	ENSMUSG00195015896	miRNA gene	Chr14:53614481-53614567 (+)
AKR/J	ENSMUSG00220033501	miRNA gene	Chr14:52954990-52955076 (+)
BALB/cJ	ENSMUSG00180035947	miRNA gene	Chr14:53230608-53230694 (+)
C3H/HeJ	ENSMUSG00175038851	miRNA gene	Chr14:54976278-54976364 (+)
C57BL/6NJ	ENSMUSG00215029496	miRNA gene	Chr14:53161341-53161427 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007383	miRNA gene	Chr14:55741062-55741149 (+)
CAST/EiJ	ENSTCUG00005039266	miRNA gene	Chr14:54876319-54876405 (+)
CBA/J	ENSMUSG00210042166	miRNA gene	Chr14:53601914-53602000 (+)
DBA/2J	ENSMUSG00185032458	miRNA gene	Chr14:58774143-58774229 (+)
FVB/NJ	ENSMUSG00205039777	miRNA gene	Chr14:53117320-53117406 (+)
JF1/MsJ	ENSUMUG00000046997	miRNA gene	Chr14:69946620-69946706 (+)
LP/J	ENSMUSG00230037872	miRNA gene	Chr14:70803513-70803599 (+)
NOD/ShiLtJ	ENSMUSG00190043207	miRNA gene	Chr14:53396636-53396722 (+)
NZO/HlLtJ	ENSMUSG00225046811	miRNA gene	Chr14:61129616-61129702 (+)
PWK/PhJ	ENSLUMG00010039607	miRNA gene	Chr14:52835014-52835100 (+)
SPRET/EiJ	ENSMSPG00010033920	miRNA gene	Chr14:56311239-56311325 (+)
WSB/EiJ	ENSIUOG00005042461	miRNA gene	Chr14:52834251-52834337 (+)

Homology

• Gene Tree
  Mir3078
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir3078
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000092972 (Evidence)
• NCBI Gene
  100526520

Representative Sequences			Length	Strain/Species
genomic	100526520	NCBI Gene Model | MGI Sequence Detail	87	C57BL/6J
transcript	NR_037239	RefSeq | MGI Sequence Detail	87	ZRU/MplStud

Other Database
Links

miRBase

MI0014041

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4