Mir3059 Gene Detail

Summary

• Symbol
  Mir3059
• Name
  microRNA 3059
• Synonyms
  mmu-mir-3059

• Feature Type
  miRNA gene
• IDs
  MGI:4834225
  NCBI Gene: 100526516
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:101608553-101608633 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 53.06 cM

Strain
Comparison

• SNPs within 2kb
  6 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4834225	miRNA gene	Chr10:101608553-101608633 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007750	miRNA gene	Chr10:103689500-103689580 (+)
A/J	MGP_AJ_G0007746	miRNA gene	Chr10:99928329-99928409 (+)
AKR/J	MGP_AKRJ_G0007721	miRNA gene	Chr10:102831908-102831988 (+)
BALB/cJ	MGP_BALBcJ_G0007724	miRNA gene	Chr10:100228662-100228742 (+)
C3H/HeJ	MGP_C3HHeJ_G0007670	miRNA gene	Chr10:102861304-102861384 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007901	miRNA gene	Chr10:107344849-107344929 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007056	miRNA gene	Chr10:95230168-95230248 (+)
CAST/EiJ	MGP_CASTEiJ_G0007565	miRNA gene	Chr10:102867247-102867327 (+)
CBA/J	MGP_CBAJ_G0007643	miRNA gene	Chr10:111370429-111370509 (+)
DBA/2J	MGP_DBA2J_G0007677	miRNA gene	Chr10:99008835-99008915 (+)
FVB/NJ	MGP_FVBNJ_G0007694	miRNA gene	Chr10:98116825-98116905 (+)
LP/J	MGP_LPJ_G0007755	miRNA gene	Chr10:104322237-104322317 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007667	miRNA gene	Chr10:112848149-112848229 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007898	miRNA gene	Chr10:102753425-102753505 (+)
PWK/PhJ	MGP_PWKPhJ_G0007497	miRNA gene	Chr10:99086374-99086454 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007394	miRNA gene	Chr10:101575838-101575918 (+)
WSB/EiJ	MGP_WSBEiJ_G0007632	miRNA gene	Chr10:102792924-102793004 (+)

Homology

• Human Ortholog
  MIR3059, microRNA 3059

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  MIR3059, microRNA 3059
  
• Links
  HGNC:54162

  NCBI Gene ID: 113839519

  
  
• Chr Location
  12q21.32; chr12:86745068-86745149 (-)  GRCh38

---

• MGI Vertebrate Homology
  Mir3059 stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: MIR3059
• Gene Tree
  Mir3059
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir3059
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  708
• Tissues
  2
• Literature Summary
  1

Images

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000092952 (Evidence)
• NCBI Gene
  100526516

Representative Sequences			Length	Strain/Species
genomic	100526516	NCBI Gene Model | MGI Sequence Detail	81	C57BL/6J
transcript	NR_037211	RefSeq | MGI Sequence Detail	81	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  Primer pair 1

Other Database
Links

miRBase

MI0004412

References

• Summaries
  All 10

  Developmental Gene Expression 1

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:279273 Chen G, et al., Regional difference in microRNA regulation in the skull vault. Dev Dyn. 2019 Oct;248(10):1009-1019