Mir3472 Gene Detail

Summary

• Symbol
  Mir3472
• Name
  microRNA 3472
• Synonyms
  mmu-mir-3472

• Feature Type
  miRNA gene
• IDs
  MGI:4441439
  NCBI Gene: 100499526
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:143822340-143822410 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 66.25 cM

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4441439	miRNA gene	ChrX:143822340-143822410 (+)
129S1/SvImJ	ENSMUSG00200033369	miRNA gene	ChrX:122837584-122837654 (+)
A/J	ENSMUSG00195022092	miRNA gene	ChrX:126652649-126652719 (+)
AKR/J	ENSMUSG00220039677	miRNA gene	ChrX:120021266-120021336 (+)
BALB/cJ	ENSMUSG00180039980	miRNA gene	ChrX:123092610-123092680 (+)
C3H/HeJ	ENSMUSG00175031354	miRNA gene	ChrX:126996498-126996568 (+)
C57BL/6NJ	ENSMUSG00215028244	miRNA gene	ChrX:123603881-123603951 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037222	miRNA gene	ChrX:124155049-124155085 (+)
CBA/J	ENSMUSG00210033717	miRNA gene	ChrX:123920329-123920399 (+)
DBA/2J	ENSMUSG00185033622	miRNA gene	ChrX:137811261-137811331 (+)
FVB/NJ	ENSMUSG00205036237	miRNA gene	ChrX:122292127-122292197 (+)
JF1/MsJ	ENSUMUG00000034782	miRNA gene	ChrX:157049796-157049832 (+)
LP/J	ENSMUSG00230033416	miRNA gene	ChrX:144423599-144423669 (+)
NOD/ShiLtJ	ENSMUSG00190042457	miRNA gene	ChrX:123298743-123298813 (+)
NZO/HlLtJ	ENSMUSG00225043530	miRNA gene	ChrX:149133479-149133515 (+)
PWK/PhJ	ENSLUMG00010044807	miRNA gene	ChrX:121721206-121721242 (+)
SPRET/EiJ	ENSMSPG00010041923	miRNA gene	ChrX:126517705-126517741 (+)
WSB/EiJ	ENSIUOG00005041308	miRNA gene	ChrX:123956810-123956880 (+)

Homology

• Gene Tree
  Mir3472
  

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118971 (Evidence)
• NCBI Gene
  100499526

Representative Sequences			Length	Strain/Species
genomic	100499526	NCBI Gene Model | MGI Sequence Detail	71	C57BL/6J
transcript	NR_037309	RefSeq | MGI Sequence Detail	71	ZRU/MplStud

Other Database
Links

miRBase

MI0014704

References

• Summaries
  All 4
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4