Mir3470b Gene Detail

Summary

• Symbol
  Mir3470b
• Name
  microRNA 3470b
• Synonyms
  mmu-mir-3470b

• Feature Type
  miRNA gene
• IDs
  MGI:4441435
  NCBI Gene: 100499519
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:43834215-43834340 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 28.44 cM

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4441435	miRNA gene	Chr16:43834215-43834340 (+)
129S1/SvImJ	ENSMUSG00200021702	miRNA gene	Chr16:40732621-40732746 (+)
A/J	ENSMUSG00195003634	miRNA gene	Chr16:40303887-40304012 (+)
AKR/J	ENSMUSG00220022648	miRNA gene	Chr16:40642988-40643113 (+)
BALB/cJ	ENSMUSG00180029188	miRNA gene	Chr16:40510399-40510524 (+)
C3H/HeJ	ENSMUSG00175026025	miRNA gene	Chr16:40788169-40788294 (+)
C57BL/6NJ	ENSMUSG00215009224	miRNA gene	Chr16:40614195-40614320 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012864	miRNA gene	Chr16:41044193-41044318 (+)
CBA/J	ENSMUSG00210016850	miRNA gene	Chr16:40810929-40811054 (+)
DBA/2J	ENSMUSG00185011114	miRNA gene	Chr16:40690133-40690258 (+)
FVB/NJ	ENSMUSG00205012690	miRNA gene	Chr16:40642617-40642742 (+)
JF1/MsJ	ENSUMUG00000029966	miRNA gene	Chr16:40926731-40926856 (+)
LP/J	ENSMUSG00230029630	miRNA gene	Chr16:43285850-43285975 (+)
NOD/ShiLtJ	ENSMUSG00190019351	miRNA gene	Chr16:40819899-40820024 (+)
NZO/HlLtJ	ENSMUSG00225028907	miRNA gene	Chr16:46371803-46371928 (+)
PWK/PhJ	ENSLUMG00010027817	miRNA gene	Chr16:40825236-40825359 (+)
SPRET/EiJ	ENSMSPG00010007470	miRNA gene	Chr16:40864897-40865022 (+)
WSB/EiJ	ENSIUOG00005013379	miRNA gene	Chr16:40930391-40930516 (+)

Homology

• Gene Tree
  Mir3470b
  

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119636 (Evidence)
• NCBI Gene
  100499519

Representative Sequences			Length	Strain/Species
genomic	100499519	NCBI Gene Model | MGI Sequence Detail	126	C57BL/6J
transcript	NR_037302	RefSeq | MGI Sequence Detail	126	ZRU/MplStud

Other Database
Links

miRBase

MI0014697

References

• Summaries
  All 4
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4