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Trav4-3 Gene Detail
Summary
  • Symbol
    Trav4-3
  • Name
    T cell receptor alpha variable 4-3
  • Synonyms
    Gm17002
  • Feature Type
    gene segment
  • IDs
    MGI:4440478
    NCBI Gene: 100126471
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:53836368-53836867 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 27.43 cM
Strain
Comparison
more
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4440478
gene segment Chr14:53836285-53836867 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002560
gene segment Chr14:47483636-47484322 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0002650
gene segment Chr14:49923487-49924040 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0002455
gene segment Chr14:44210604-44211134 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0002557
gene segment Chr14:48448364-48460483 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0002651
gene segment Chr14:47032217-47032798 (+)
PWK/PhJ MGP_PWKPhJ_G0002428
gene segment Chr14:42874217-42874746 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002375
gene segment Chr14:43223574-43224105 (-)
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 100126471 NCBI Gene Model | MGI Sequence Detail 500 C57BL/6J ±  kb
polypeptide A0A0B4J1K1 UniProt | EBI | MGI Sequence Detail 110 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 5
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory