Gm16933 Gene Detail

Summary

• Symbol
  Gm16933
• Name
  predicted gene, 16933

• Feature Type
  lncRNA gene
• IDs
  MGI:4439857
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:25527068-25531908 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 13.70 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  19 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439857	lncRNA gene	Chr8:25527068-25531908 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015708	unclassified non-coding RNA gene	Chr8:23034812-23039534 (+)
A/J	MGP_AJ_G0015686	unclassified non-coding RNA gene	Chr8:22228900-22233901 (+)
AKR/J	MGP_AKRJ_G0015649	unclassified non-coding RNA gene	Chr8:22945144-22949868 (+)
BALB/cJ	MGP_BALBcJ_G0015647	unclassified non-coding RNA gene	Chr8:22373284-22378019 (+)
C3H/HeJ	MGP_C3HHeJ_G0015469	unclassified non-coding RNA gene	Chr8:23163563-23168277 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016102	unclassified non-coding RNA gene	Chr8:23982589-23987285 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013831	unclassified non-coding RNA gene	Chr8:19511815-19516352 (+)
CAST/EiJ	MGP_CASTEiJ_G0015024	unclassified non-coding RNA gene	Chr8:22588151-22592839 (+)
CBA/J	MGP_CBAJ_G0015450	unclassified non-coding RNA gene	Chr8:24899503-24904235 (+)
DBA/2J	MGP_DBA2J_G0015546	unclassified non-coding RNA gene	Chr8:22199147-22203862 (+)
FVB/NJ	MGP_FVBNJ_G0015552	unclassified non-coding RNA gene	Chr8:21999349-22004058 (+)
LP/J	MGP_LPJ_G0015626	unclassified non-coding RNA gene	Chr8:23025738-23030451 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015574	unclassified non-coding RNA gene	Chr8:24418170-24422921 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016144	unclassified non-coding RNA gene	Chr8:22898737-22903464 (+)
PWK/PhJ	MGP_PWKPhJ_G0014806	unclassified non-coding RNA gene	Chr8:21803988-21808710 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014595	unclassified non-coding RNA gene	Chr8:22235451-22240156 (+)
WSB/EiJ	MGP_WSBEiJ_G0015129	unclassified non-coding RNA gene	Chr8:23099605-23104304 (+)

Homology

• Gene Tree
  Gm16933
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000086289 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086289	Ensembl Gene Model | MGI Sequence Detail	4841	C57BL/6J
transcript	ENSMUST00000141741	Ensembl | MGI Sequence Detail	2169	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;