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Gm16894 Gene Detail
Summary
  • Symbol
    Gm16894
  • Name
    predicted gene, 16894
  • Feature Type
    lncRNA gene
  • IDs
    MGI:4439818
    NCBI Gene: 100047133
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:40115388-40125011 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 1, 18.64 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    90 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439818
lncRNA gene Chr1:40115372-40125011 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002671
antisense lncRNA gene Chr1:38859677-38869237 (-)
A/J MGP_AJ_G0002647
antisense lncRNA gene Chr1:37757654-37767288 (-)
AKR/J MGP_AKRJ_G0002627
antisense lncRNA gene Chr1:38249738-38260666 (-)
BALB/cJ MGP_BALBcJ_G0002633
antisense lncRNA gene Chr1:37419264-37429340 (-)
C3H/HeJ MGP_C3HHeJ_G0002593
antisense lncRNA gene Chr1:38538561-38548751 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002777
antisense lncRNA gene Chr1:40452518-40464405 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002324
antisense lncRNA gene Chr1:34704312-34713696 (-)
CAST/EiJ MGP_CASTEiJ_G0002566
antisense lncRNA gene Chr1:38445911-38457179 (-)
CBA/J MGP_CBAJ_G0002588
antisense lncRNA gene Chr1:41636274-41649255 (-)
DBA/2J MGP_DBA2J_G0002593
antisense lncRNA gene Chr1:37045965-37055830 (-)
FVB/NJ MGP_FVBNJ_G0002613
antisense lncRNA gene Chr1:36590266-36599505 (-)
LP/J MGP_LPJ_G0002673
antisense lncRNA gene Chr1:39193955-39204240 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002604
antisense lncRNA gene Chr1:43667343-43677853 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002782
antisense lncRNA gene Chr1:38398792-38409433 (-)
PWK/PhJ MGP_PWKPhJ_G0002523
antisense lncRNA gene Chr1:36869928-36879707 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002477
antisense lncRNA gene Chr1:38341450-38350712 (-)
WSB/EiJ MGP_WSBEiJ_G0002595
antisense lncRNA gene Chr1:38355232-38366086 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097899 Ensembl Gene Model | MGI Sequence Detail 9624 C57BL/6J ±  kb
transcript ENSMUST00000181756 Ensembl | MGI Sequence Detail 842 Not Applicable  
For the selected sequence
Molecular
Reagents
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  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 6
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory