Gm16677 Gene Detail

Summary

• Symbol
  Gm16677
• Name
  predicted gene, 16677

• Feature Type
  lncRNA gene
• IDs
  MGI:4439601
  NCBI Gene: 100504477
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:69567156-69574586 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 36.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  22 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4439601	lncRNA gene	Chr14:69544999-69574621 (-)
129S1/SvImJ	ENSMUSG00200030879	lncRNA gene	Chr14:58165293-58174451 (-)
A/J	ENSMUSG00195015866	lncRNA gene	Chr14:58356535-58365705 (-)
AKR/J	ENSMUSG00220034449	lncRNA gene	Chr14:57692297-57701467 (-)
BALB/cJ	ENSMUSG00180035688	lncRNA gene	Chr14:57965127-57974299 (-)
C3H/HeJ	ENSMUSG00175039285	lncRNA gene	Chr14:59725714-59734880 (-)
C57BL/6NJ	ENSMUSG00215028356	lncRNA gene	Chr14:57901856-57911027 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039493	lncRNA gene	Chr14:59593897-59603075 (-)
CBA/J	ENSMUSG00210041369	lncRNA gene	Chr14:58341559-58350724 (-)
DBA/2J	ENSMUSG00185024316	lncRNA gene	Chr14:63511128-63520294 (-)
FVB/NJ	ENSMUSG00205037115	lncRNA gene	Chr14:57851012-57860180 (-)
JF1/MsJ	ENSUMUG00000043860	lncRNA gene	Chr14:74675886-74685072 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190042812	lncRNA gene	Chr14:58136351-58145520 (-)
NZO/HlLtJ	ENSMUSG00225040304	lncRNA gene	Chr14:65863624-65872790 (-)
PWK/PhJ	ENSLUMG00010038766	lncRNA gene	Chr14:57534083-57543198 (-)
SPRET/EiJ	ENSMSPG00010028282	lncRNA gene	Chr14:61087228-61096362 (-)
WSB/EiJ	ENSIUOG00005040220	lncRNA gene	Chr14:57578172-57587340 (-)

Homology

• Gene Tree
  Gm16677
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm16677
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  7

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  70
• RefSeq
  1

• Ensembl
  ENSMUSG00000097511 (Evidence)
• NCBI Gene
  100504477

Representative Sequences			Length	Strain/Species
genomic	100504477	NCBI Gene Model | MGI Sequence Detail	7431	C57BL/6J
transcript	NR_045091	RefSeq | MGI Sequence Detail	521	ZRU/MplStud

Molecular
Reagents

• All nucleic 7

  cDNA 7

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;