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Ighv5-17 Gene Detail
Summary
  • Symbol
    Ighv5-17
  • Name
    immunoglobulin heavy variable 5-17
  • Synonyms
    Gm16609
  • Feature Type
    gene segment
  • IDs
    MGI:4439533
    NCBI Gene: 780794
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr12:113859149-113859442 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 62.21 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    159 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4439533
gene segment Chr12:113859149-113859670 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000049
gene segment Chr12:116447083-116447604 (-)
A/J MGP_AJ_G0000051
gene segment Chr12:111956088-111956609 (-)
AKR/J MGP_AKRJ_G0000052
gene segment Chr12:115346378-115346889 (-)
BALB/cJ MGP_BALBcJ_G0000048
gene segment Chr12:112398297-112398818 (-)
C3H/HeJ MGP_C3HHeJ_G0000049
gene segment Chr12:115761792-115762303 (-)
C57BL/6NJ MGP_C57BL6NJ_G0000067
gene segment Chr12:120055888-120056409 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0000037
gene segment Chr12:108398193-108398709 (-)
CAST/EiJ MGP_CASTEiJ_G0000056
gene segment Chr12:110659961-110660472 (-)
CBA/J MGP_CBAJ_G0000047
gene segment Chr12:124690828-124691339 (-)
DBA/2J MGP_DBA2J_G0000052
gene segment Chr12:111545031-111545552 (-)
FVB/NJ MGP_FVBNJ_G0000050
gene segment Chr12:110262342-110262858 (-)
LP/J MGP_LPJ_G0000055
gene segment Chr12:116394855-116395376 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0000054
gene segment Chr12:127795365-127795886 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000063
gene segment Chr12:114747135-114747646 (-)
PWK/PhJ MGP_PWKPhJ_G0000045
gene segment Chr12:106238349-106238870 (-)
SPRET/EiJ MGP_SPRETEiJ_G0000042
gene segment Chr12:108808151-108808672 (-)
WSB/EiJ MGP_WSBEiJ_G0000055
gene segment Chr12:115692720-115693241 (-)



Homology
less
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 780794 NCBI Gene Model | MGI Sequence Detail 294 C57BL/6J ±  kb
transcript J00522 GenBank | EMBL | DDBJ | MGI Sequence Detail 408 Not Specified  
polypeptide A0A075B5R1 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 7
    Gene Ontology 1
  • Earliest
    J:6532 Bothwell AL, et al., Heavy chain variable region contribution to the NPb family of antibodies: somatic mutation evident in a gamma 2a variable region. Cell. 1981 Jun;24(3):625-37
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/06/2019
MGI 6.14
The Jackson Laboratory