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Vmn1r196 Gene Detail
Summary
  • Symbol
    Vmn1r196
  • Name
    vomeronasal 1 receptor 196
  • Synonyms
    V1rh19
  • Feature Type
    protein coding gene
  • IDs
    MGI:4438447
    NCBI Gene: 100312484
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr13:22293193-22294098 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 8.47 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_4438447
protein coding gene Chr13:22289920-22298360 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020316
protein coding gene Chr13:19625747-19626652 (+)
A/J MGP_AJ_G0020274
protein coding gene Chr13:19217139-19218044 (+)
AKR/J MGP_AKRJ_G0020245
protein coding gene Chr13:19513155-19514060 (+)
BALB/cJ MGP_BALBcJ_G0020261
protein coding gene Chr13:19218461-19219366 (+)
C3H/HeJ MGP_C3HHeJ_G0020069
protein coding gene Chr13:19581636-19582541 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020702
protein coding gene Chr13:20320581-20321486 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018306
protein coding gene Chr13:17397007-17397912 (+)
CAST/EiJ MGP_CASTEiJ_G0019593
protein coding gene Chr13:19394088-19394993 (+)
CBA/J MGP_CBAJ_G0020021
protein coding gene Chr13:21016106-21017011 (+)
DBA/2J MGP_DBA2J_G0020147
protein coding gene Chr13:18818404-18819309 (+)
FVB/NJ MGP_FVBNJ_G0020132
protein coding gene Chr13:18447786-18448691 (+)
LP/J MGP_LPJ_G0020221
protein coding gene Chr13:19856426-19857331 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020165
protein coding gene Chr13:21359360-21360265 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020734
protein coding gene Chr13:19295788-19297648 (+)
PWK/PhJ MGP_PWKPhJ_G0019351
protein coding gene Chr13:18911860-18912975 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019160
protein coding gene Chr13:18249402-18250307 (+)
WSB/EiJ MGP_WSBEiJ_G0019652
protein coding gene Chr13:19442035-19442940 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Vmn1r196
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100312484 NCBI Gene Model | MGI Sequence Detail 906 C57BL/6J ±  kb
transcript NM_001167541 RefSeq | MGI Sequence Detail 906 Not Specified  
polypeptide NP_001161013 RefSeq | MGI Sequence Detail 301 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR004072 Vomeronasal receptor, type 1
Molecular
Reagents
less

  • Microarray probesets 1
Other
Accession IDs
less
MGI:2159684
References
more
  • Summaries
    All 18
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory