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n-TRtct5 Gene Detail
Summary
  • Symbol
    n-TRtct5
  • Name
    nuclear encoded tRNA arginine 5 (anticodon TCT)
  • Synonyms
    trna730-ArgTCT
  • Feature Type
    tRNA gene
  • IDs
    MGI:4413733
    NCBI Gene: 102467638
Location & Maps
more
  • Sequence Map
    Chr1:173390329-173390402 bp, + strand
  • From GtRNAdb annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      74 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, Syntenic
  • Mapping Data
    1 experiment
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    18 phenotypes from multigenic genotypes
    1 phenotype reference
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a spontaneous C to T transition, found in C57BL/6J and C57BL/6JEiJ but not other inbred strains, display abnormal translational elongation.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 102467638 NCBI Gene Model | MGI Sequence Detail 74 C57BL/6J ±  kb
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    39 from dbSNP Build 142
References
more
  • Summaries
    All 6
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:152375 Chan PP, et al., GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res. 2009 Jan;37(Database issue):D93-7
  • Latest
    J:211326 Ishimura R, et al., Ribosome stalling induced by mutation of a CNS-specific tRNA causes neurodegeneration. Science. 2014;345:455-459

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/12/2017
MGI 6.10
The Jackson Laboratory