Mir599 Gene Detail

Summary

• Symbol
  Mir599
• Name
  microRNA 599
• Synonyms
  mmu-mir-599

• Feature Type
  miRNA gene
• IDs
  MGI:4358945
  NCBI Gene: 100316736
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:35660977-35661064 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 14.46 cM

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_4358945	miRNA gene	Chr15:35660977-35661064 (-)
129S1/SvImJ	ENSMUSG00200027596	miRNA gene	Chr15:32682087-32682174 (-)
A/J	ENSMUSG00195037174	miRNA gene	Chr15:32601025-32601112 (-)
AKR/J	ENSMUSG00220030392	miRNA gene	Chr15:32509440-32509527 (-)
BALB/cJ	ENSMUSG00180034411	miRNA gene	Chr15:32557219-32557306 (-)
C3H/HeJ	ENSMUSG00175029065	miRNA gene	Chr15:32765337-32765424 (-)
C57BL/6NJ	ENSMUSG00215022685	miRNA gene	Chr15:32573198-32573285 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007413	miRNA gene	Chr15:30590280-30590366 (-)
CAST/EiJ	ENSTCUG00005010880	miRNA gene	Chr15:32598539-32598626 (-)
CBA/J	ENSMUSG00210018389	miRNA gene	Chr15:32675848-32675935 (-)
DBA/2J	ENSMUSG00185035641	miRNA gene	Chr15:32660650-32660737 (-)
FVB/NJ	ENSMUSG00205034902	miRNA gene	Chr15:32574043-32574130 (-)
JF1/MsJ	ENSUMUG00000037309	miRNA gene	Chr15:32557466-32557553 (-)
LP/J	ENSMUSG00230013218	miRNA gene	Chr15:36063444-36063531 (-)
NOD/ShiLtJ	ENSMUSG00190031530	miRNA gene	Chr15:32643916-32644003 (-)
NZO/HlLtJ	ENSMUSG00225032125	miRNA gene	Chr15:36352059-36352146 (-)
PWK/PhJ	ENSLUMG00010032703	miRNA gene	Chr15:32731974-32732061 (-)
SPRET/EiJ	ENSMSPG00010014244	miRNA gene	Chr15:33334071-33334158 (-)
WSB/EiJ	ENSIUOG00005033949	miRNA gene	Chr15:32680494-32680581 (-)

Homology

• Human Ortholog
  MIR599, microRNA 599

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  MIR599, microRNA 599
  
• Synonyms
  hsa-mir-599, MIRN599
• Links
  HGNC:32855

  NCBI Gene ID: 693184

  
  
• Chr Location
  chr8:99536636-99536730 (-)  GRCh38

---

• MGI Vertebrate Homology
  Mir599 stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: MIR599
• Gene Tree
  Mir599
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Mir599
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  1
• GO References
  1

Expression

• Assay Results
  608
• Tissues
  11
• Literature Summary
  1

Images

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000076333 (Evidence)
• NCBI Gene
  100316736

Representative Sequences			Length	Strain/Species
genomic	100316736	NCBI Gene Model | MGI Sequence Detail	88	C57BL/6J
transcript	NR_035527	RefSeq | MGI Sequence Detail	88	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  Primer pair 1

Other Database
Links

miRBase

MI0012529

References

• Summaries
  All 12

  Developmental Gene Expression 1

  Gene Ontology 1

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:286856 Funada K, et al., microRNA-875-5p plays critical role for mesenchymal condensation in epithelial-mesenchymal interaction during tooth development. Sci Rep. 2020 Mar 18;10(1):4918