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Jmjd7 Gene Detail
Summary
  • Symbol
    Jmjd7
  • Name
    jumonji domain containing 7
  • Feature Type
    protein coding gene
  • IDs
    MGI:3845785
    NCBI Gene: 433466
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:120027483-120032594 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 60.09 cM
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3845785
protein coding gene Chr2:120027483-120032604 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026356
protein coding gene Chr2:122882446-122887659 (+)
A/J MGP_AJ_G0026317
protein coding gene Chr2:117846078-117850946 (+)
AKR/J MGP_AKRJ_G0026296
protein coding gene Chr2:121134265-121139227 (+)
BALB/cJ MGP_BALBcJ_G0026330
protein coding gene Chr2:118085292-118090160 (+)
C3H/HeJ MGP_C3HHeJ_G0026076
protein coding gene Chr2:121599904-121604864 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026777
protein coding gene Chr2:126893791-126898902 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024157
protein coding gene Chr2:112866580-112871740 (+)
CAST/EiJ MGP_CASTEiJ_G0025538
protein coding gene Chr2:121917658-121922627 (+)
CBA/J MGP_CBAJ_G0026052
protein coding gene Chr2:131326984-131331948 (+)
DBA/2J MGP_DBA2J_G0026191
protein coding gene Chr2:117234946-117239814 (+)
FVB/NJ MGP_FVBNJ_G0026153
protein coding gene Chr2:116069163-116074130 (+)
LP/J MGP_LPJ_G0026292
protein coding gene Chr2:123141169-123146132 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026172
protein coding gene Chr2:135640865-135645834 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026832
protein coding gene Chr2:121256429-121261392 (+)
PWK/PhJ MGP_PWKPhJ_G0025274
protein coding gene Chr2:116832597-116837816 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025073
protein coding gene Chr2:120452216-120457317 (+)
WSB/EiJ MGP_WSBEiJ_G0025607
protein coding gene Chr2:122098495-122103458 (+)



Homology
more
  • Human Ortholog
    JMJD7, jumonji domain containing 7
  • Vertebrate Orthologs
    9
  • Human Ortholog
    JMJD7, jumonji domain containing 7
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 100137047
    neXtProt AC: NX_P0C870
    UniProt: P0C870

  • Chr Location
    chr15:41828085-41837587 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Jmjd7
  • Incidental Mutations
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000098789 Ensembl Gene Model | MGI Sequence Detail 5112 C57BL/6J ±  kb
transcript ENSMUST00000044675 Ensembl | MGI Sequence Detail 1373 Not Applicable  
polypeptide ENSMUSP00000041220 Ensembl | MGI Sequence Detail 316 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 16
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 4
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/04/2019
MGI 6.14
The Jackson Laboratory