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Umad1 Gene Detail
Summary
  • Symbol
    Umad1
  • Name
    UMAP1-MVP12 associated (UMA) domain containing 1
  • Synonyms
    Gm16039
  • Feature Type
    protein coding gene
  • IDs
    MGI:3840148
    NCBI Gene: 100036521
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:8259288-8428767 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 3.53 cM
Strain
Comparison
more
  • SNPs within 2kb
    1617 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3840148
protein coding gene Chr6:8259288-8459470 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030449
protein coding gene Chr6:5177003-5394344 (+)
A/J MGP_AJ_G0030422
protein coding gene Chr6:5013125-5219118 (+)
AKR/J MGP_AKRJ_G0030349
protein coding gene Chr6:5182409-5401776 (+)
BALB/cJ MGP_BALBcJ_G0030431
protein coding gene Chr6:4977572-5177659 (+)
C3H/HeJ MGP_C3HHeJ_G0030145
protein coding gene Chr6:5088734-5293217 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030886
protein coding gene Chr6:5331325-5553398 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028097
protein coding gene Chr6:4524665-4718702 (+)
CAST/EiJ MGP_CASTEiJ_G0029546
protein coding gene Chr6:5063466-5273203 (+)
CBA/J MGP_CBAJ_G0030123
protein coding gene Chr6:5474723-5695589 (+)
DBA/2J MGP_DBA2J_G0030267
protein coding gene Chr6:4939294-5146253 (+)
FVB/NJ MGP_FVBNJ_G0030221
protein coding gene Chr6:4917392-5116882 (+)
LP/J MGP_LPJ_G0030354
protein coding gene Chr6:5146658-5364810 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030257
protein coding gene Chr6:5554537-5783786 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030916
protein coding gene Chr6:5078189-5279586 (+)
PWK/PhJ MGP_PWKPhJ_G0029261
protein coding gene Chr6:4834560-5038180 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029097
protein coding gene Chr6:5124271-5334209 (+)
WSB/EiJ MGP_WSBEiJ_G0029623
protein coding gene Chr6:5062918-5271123 (+)



Homology
more
  • Human Ortholog
    UMAD1, UBAP1-MVB12-associated (UMA) domain containing 1
  • Human Ortholog
    UMAD1, UBAP1-MVB12-associated (UMA) domain containing 1
    Orthology source: HGNC
  • Synonyms
    RPA3-AS1, RPA3OS
  • Links
    NCBI Gene ID: 729852
    neXtProt AC: NX_C9J7I0
    UniProt: C9J7I0

  • Chr Location
    7p21.3; chr7:7640636-7879223 (+)  GRCh38.p7

  • HCOP
    human homology predictions: UMAD1
  • Gene Tree
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 100036521 NCBI Gene Model | MGI Sequence Detail 169480 C57BL/6J ±  kb
transcript NM_001302353 RefSeq | MGI Sequence Detail 2264 C57BL/6  
polypeptide NP_001289282 RefSeq | MGI Sequence Detail 159 C57BL/6  
For the selected sequence
Protein
Information
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  • UniProt
    5 Sequences
  • InterPro Domains
    IPR023340 UMA domain
Molecular
Reagents
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  • All nucleic 8
    cDNA 8

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Developmental Gene Expression 2
  • Earliest
    J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
  • Latest
    J:265948 Cajigas I, et al., The Evf2 Ultraconserved Enhancer lncRNA Functionally and Spatially Organizes Megabase Distant Genes in the Developing Forebrain. Mol Cell. 2018 Sep 20;71(6):956-972.e9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory