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Gm16341 Gene Detail
Summary
  • Symbol
    Gm16341
  • Name
    predicted gene 16341
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3840137
    NCBI Gene: 102634967
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:86209194-86229492 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 43.94 cM
Strain
Comparison
more
  • SNPs within 2kb
    124 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3840137
 lncRNA gene Chr1:86203231-86229492 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002710
 antisense lncRNA gene Chr1:87524164-87551185 (-)
A/J MGP_AJ_G0002686
 antisense lncRNA gene Chr1:84286998-84314447 (-)
AKR/J MGP_AKRJ_G0002667
 antisense lncRNA gene Chr1:86726363-86763264 (-)
BALB/cJ MGP_BALBcJ_G0002673
 antisense lncRNA gene Chr1:84397339-84425105 (-)
C3H/HeJ MGP_C3HHeJ_G0002632
 antisense lncRNA gene Chr1:86978584-87008324 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002816
 antisense lncRNA gene Chr1:90849130-90884577 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002364
 antisense lncRNA gene Chr1:78781634-78807823 (-)
CAST/EiJ MGP_CASTEiJ_G0002604
 antisense lncRNA gene Chr1:86222606-86247989 (-)
CBA/J MGP_CBAJ_G0002627
 antisense lncRNA gene Chr1:93667635-93703951 (-)
DBA/2J MGP_DBA2J_G0002633
 antisense lncRNA gene Chr1:83594070-83620616 (-)
FVB/NJ MGP_FVBNJ_G0002653
 antisense lncRNA gene Chr1:82643338-82670296 (-)
LP/J MGP_LPJ_G0002712
 antisense lncRNA gene Chr1:88626722-88658123 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002643
 antisense lncRNA gene Chr1:96948525-96978441 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002821
 antisense lncRNA gene Chr1:86856061-86887418 (-)
PWK/PhJ MGP_PWKPhJ_G0002562
 antisense lncRNA gene Chr1:82877948-82906414 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002515
 antisense lncRNA gene Chr1:85828079-85849238 (-)
WSB/EiJ MGP_WSBEiJ_G0002634
 antisense lncRNA gene Chr1:86497582-86530462 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    11
  • Chemically induced (other)
    1
  • Gene trapped
    9
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm16341
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    6
Representative SequencesLengthStrain/SpeciesFlank
genomic 102634967 NCBI Gene Model | MGI Sequence Detail 20299 C57BL/6J ±  kb
transcript KY467497 GenBank | ENA | DDBJ | MGI Sequence Detail 377 ZRU/MplStud  
For the selected sequence
References
more
  • Summaries
    All 13
    Phenotypes 7
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory